Gene : Brast08G054600 B. stacei v1.1
Defline:  (1 of 2) PTHR11851//PTHR11851:SF145 - METALLOPROTEASE Genomic Order:  546
Name:  ? Brast08G054600 Secondary Identifier:  ? PAC:32859769
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei PWY-3781 Brachypodium stacei pathologic  
Bstacei PWY-7279 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast08G054600 0.5kb upstream 0.5kb upstream 6011 true Chr08: 3116148-3122158 Brachypodium stacei
Brast08G054600 0.5kb upstream 0.5kb upstream 500 false Chr08: 3121659-3122158 Brachypodium stacei
Brast08G054600 0.5kb downstream 0.5kb downstream 6011 true Chr08: 3115648-3121658 Brachypodium stacei
Brast08G054600 0.5kb downstream 0.5kb downstream 500 false Chr08: 3115648-3116147 Brachypodium stacei
Brast08G054600 1.0kb upstream 1.0kb upstream 6511 true Chr08: 3116148-3122658 Brachypodium stacei
Brast08G054600 1.0kb upstream 1.0kb upstream 1000 false Chr08: 3121659-3122658 Brachypodium stacei
Brast08G054600 1.0kb downstream 1.0kb downstream 6511 true Chr08: 3115148-3121658 Brachypodium stacei
Brast08G054600 1.0kb downstream 1.0kb downstream 1000 false Chr08: 3115148-3116147 Brachypodium stacei
Brast08G054600 2.0kb upstream 2.0kb upstream 7511 true Chr08: 3116148-3123658 Brachypodium stacei
Brast08G054600 2.0kb upstream 2.0kb upstream 2000 false Chr08: 3121659-3123658 Brachypodium stacei
Brast08G054600 2.0kb downstream 2.0kb downstream 7511 true Chr08: 3114148-3121658 Brachypodium stacei
Brast08G054600 2.0kb downstream 2.0kb downstream 2000 false Chr08: 3114148-3116147 Brachypodium stacei
Brast08G054600 5.0kb upstream 5.0kb upstream 10511 true Chr08: 3116148-3126658 Brachypodium stacei
Brast08G054600 5.0kb upstream 5.0kb upstream 5000 false Chr08: 3121659-3126658 Brachypodium stacei
Brast08G054600 5.0kb downstream 5.0kb downstream 10511 true Chr08: 3111148-3121658 Brachypodium stacei
Brast08G054600 5.0kb downstream 5.0kb downstream 5000 false Chr08: 3111148-3116147 Brachypodium stacei
Brast08G054600 10.0kb upstream 10.0kb upstream 15511 true Chr08: 3116148-3131658 Brachypodium stacei
Brast08G054600 10.0kb upstream 10.0kb upstream 10000 false Chr08: 3121659-3131658 Brachypodium stacei
Brast08G054600 10.0kb downstream 10.0kb downstream 15511 true Chr08: 3106148-3121658 Brachypodium stacei
Brast08G054600 10.0kb downstream 10.0kb downstream 10000 false Chr08: 3106148-3116147 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
124582682 5269 Grass View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain