Gene : Brast09G139400 B. stacei v1.1

Defline:  (1 of 1) PTHR12695 - GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 Genomic Order:  1394
Name:  ? Brast09G139400 Secondary Identifier:  ? PAC:32854481

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast09G139400 0.5kb upstream 0.5kb upstream 3883 true Chr09: 12572280-12576162 Brachypodium stacei
Brast09G139400 0.5kb upstream 0.5kb upstream 500 false Chr09: 12575663-12576162 Brachypodium stacei
Brast09G139400 0.5kb downstream 0.5kb downstream 3883 true Chr09: 12571780-12575662 Brachypodium stacei
Brast09G139400 0.5kb downstream 0.5kb downstream 500 false Chr09: 12571780-12572279 Brachypodium stacei
Brast09G139400 1.0kb upstream 1.0kb upstream 4383 true Chr09: 12572280-12576662 Brachypodium stacei
Brast09G139400 1.0kb upstream 1.0kb upstream 1000 false Chr09: 12575663-12576662 Brachypodium stacei
Brast09G139400 1.0kb downstream 1.0kb downstream 4383 true Chr09: 12571280-12575662 Brachypodium stacei
Brast09G139400 1.0kb downstream 1.0kb downstream 1000 false Chr09: 12571280-12572279 Brachypodium stacei
Brast09G139400 2.0kb upstream 2.0kb upstream 5383 true Chr09: 12572280-12577662 Brachypodium stacei
Brast09G139400 2.0kb upstream 2.0kb upstream 2000 false Chr09: 12575663-12577662 Brachypodium stacei
Brast09G139400 2.0kb downstream 2.0kb downstream 5383 true Chr09: 12570280-12575662 Brachypodium stacei
Brast09G139400 2.0kb downstream 2.0kb downstream 2000 false Chr09: 12570280-12572279 Brachypodium stacei
Brast09G139400 5.0kb upstream 5.0kb upstream 8383 true Chr09: 12572280-12580662 Brachypodium stacei
Brast09G139400 5.0kb upstream 5.0kb upstream 5000 false Chr09: 12575663-12580662 Brachypodium stacei
Brast09G139400 5.0kb downstream 5.0kb downstream 8383 true Chr09: 12567280-12575662 Brachypodium stacei
Brast09G139400 5.0kb downstream 5.0kb downstream 5000 false Chr09: 12567280-12572279 Brachypodium stacei
Brast09G139400 10.0kb upstream 10.0kb upstream 13383 true Chr09: 12572280-12585662 Brachypodium stacei
Brast09G139400 10.0kb upstream 10.0kb upstream 10000 false Chr09: 12575663-12585662 Brachypodium stacei
Brast09G139400 10.0kb downstream 10.0kb downstream 13383 true Chr09: 12562280-12575662 Brachypodium stacei
Brast09G139400 10.0kb downstream 10.0kb downstream 10000 false Chr09: 12562280-12572279 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570380 5269 Grass View MSA
122046479 5273 Angiosperm View MSA
121344622 5274 Embryophyte View MSA
123424882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain