Gene : Brast10G007800 B. stacei v1.1
Defline:  (1 of 1) PTHR11540:SF27 - MALATE DEHYDROGENASE, GLYOXYSOMAL-RELATED Genomic Order:  78
Name:  ? Brast10G007800 Secondary Identifier:  ? PAC:32847066
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei GLUCONEO-PWY Brachypodium stacei pathologic  
Bstacei GLYOXYLATE-BYPASS Brachypodium stacei pathologic  
Bstacei PWY-5464 Brachypodium stacei pathologic  
Bstacei PWY-561 Brachypodium stacei pathologic  
Bstacei PWY-5690 Brachypodium stacei pathologic  
Bstacei PWY-7115 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G007800 0.5kb upstream 0.5kb upstream 5591 true Chr10: 401236-406826 Brachypodium stacei
Brast10G007800 0.5kb upstream 0.5kb upstream 500 false Chr10: 401236-401735 Brachypodium stacei
Brast10G007800 0.5kb downstream 0.5kb downstream 5591 true Chr10: 401736-407326 Brachypodium stacei
Brast10G007800 0.5kb downstream 0.5kb downstream 500 false Chr10: 406827-407326 Brachypodium stacei
Brast10G007800 1.0kb upstream 1.0kb upstream 6091 true Chr10: 400736-406826 Brachypodium stacei
Brast10G007800 1.0kb upstream 1.0kb upstream 1000 false Chr10: 400736-401735 Brachypodium stacei
Brast10G007800 1.0kb downstream 1.0kb downstream 6091 true Chr10: 401736-407826 Brachypodium stacei
Brast10G007800 1.0kb downstream 1.0kb downstream 1000 false Chr10: 406827-407826 Brachypodium stacei
Brast10G007800 2.0kb upstream 2.0kb upstream 7091 true Chr10: 399736-406826 Brachypodium stacei
Brast10G007800 2.0kb upstream 2.0kb upstream 2000 false Chr10: 399736-401735 Brachypodium stacei
Brast10G007800 2.0kb downstream 2.0kb downstream 7091 true Chr10: 401736-408826 Brachypodium stacei
Brast10G007800 2.0kb downstream 2.0kb downstream 2000 false Chr10: 406827-408826 Brachypodium stacei
Brast10G007800 5.0kb upstream 5.0kb upstream 10091 true Chr10: 396736-406826 Brachypodium stacei
Brast10G007800 5.0kb upstream 5.0kb upstream 5000 false Chr10: 396736-401735 Brachypodium stacei
Brast10G007800 5.0kb downstream 5.0kb downstream 10091 true Chr10: 401736-411826 Brachypodium stacei
Brast10G007800 5.0kb downstream 5.0kb downstream 5000 false Chr10: 406827-411826 Brachypodium stacei
Brast10G007800 10.0kb upstream 10.0kb upstream 15091 true Chr10: 391736-406826 Brachypodium stacei
Brast10G007800 10.0kb upstream 10.0kb upstream 10000 false Chr10: 391736-401735 Brachypodium stacei
Brast10G007800 10.0kb downstream 10.0kb downstream 15091 true Chr10: 401736-416826 Brachypodium stacei
Brast10G007800 10.0kb downstream 10.0kb downstream 10000 false Chr10: 406827-416826 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579524 5269 Grass View MSA
122041534 5273 Angiosperm View MSA
121344614 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain