Gene : Brast10G090500 B. stacei v1.1
Defline:  (1 of 1) PTHR11451:SF21 - BIFUNCTIONAL GLUTAMATE/PROLINE--TRNA LIGASE Genomic Order:  905
Name:  ? Brast10G090500 Secondary Identifier:  ? PAC:32847037
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei TRNA-CHARGING-PWY Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G090500 0.5kb upstream 0.5kb upstream 8269 true Chr10: 6500397-6508665 Brachypodium stacei
Brast10G090500 0.5kb upstream 0.5kb upstream 500 false Chr10: 6508166-6508665 Brachypodium stacei
Brast10G090500 0.5kb downstream 0.5kb downstream 8269 true Chr10: 6499897-6508165 Brachypodium stacei
Brast10G090500 0.5kb downstream 0.5kb downstream 500 false Chr10: 6499897-6500396 Brachypodium stacei
Brast10G090500 1.0kb upstream 1.0kb upstream 8769 true Chr10: 6500397-6509165 Brachypodium stacei
Brast10G090500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 6508166-6509165 Brachypodium stacei
Brast10G090500 1.0kb downstream 1.0kb downstream 8769 true Chr10: 6499397-6508165 Brachypodium stacei
Brast10G090500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 6499397-6500396 Brachypodium stacei
Brast10G090500 2.0kb upstream 2.0kb upstream 9769 true Chr10: 6500397-6510165 Brachypodium stacei
Brast10G090500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 6508166-6510165 Brachypodium stacei
Brast10G090500 2.0kb downstream 2.0kb downstream 9769 true Chr10: 6498397-6508165 Brachypodium stacei
Brast10G090500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 6498397-6500396 Brachypodium stacei
Brast10G090500 5.0kb upstream 5.0kb upstream 12769 true Chr10: 6500397-6513165 Brachypodium stacei
Brast10G090500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 6508166-6513165 Brachypodium stacei
Brast10G090500 5.0kb downstream 5.0kb downstream 12769 true Chr10: 6495397-6508165 Brachypodium stacei
Brast10G090500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 6495397-6500396 Brachypodium stacei
Brast10G090500 10.0kb upstream 10.0kb upstream 17769 true Chr10: 6500397-6518165 Brachypodium stacei
Brast10G090500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 6508166-6518165 Brachypodium stacei
Brast10G090500 10.0kb downstream 10.0kb downstream 17769 true Chr10: 6490397-6508165 Brachypodium stacei
Brast10G090500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 6490397-6500396 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578171 5269 Grass View MSA
122046547 5273 Angiosperm View MSA
121346675 5274 Embryophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain