Gene : Brast10G029000 B. stacei v1.1
Defline:  (1 of 2) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  290
Name:  ? Brast10G029000 Secondary Identifier:  ? PAC:32847948
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstacei GLUCONEO-PWY Brachypodium stacei pathologic  
Bstacei GLYOXYLATE-BYPASS Brachypodium stacei pathologic  
Bstacei PWY-5464 Brachypodium stacei pathologic  
Bstacei PWY-561 Brachypodium stacei pathologic  
Bstacei PWY-5690 Brachypodium stacei pathologic  
Bstacei PWY-7115 Brachypodium stacei pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Brast10G029000 0.5kb upstream 0.5kb upstream 1697 true Chr10: 1789924-1791620 Brachypodium stacei
Brast10G029000 0.5kb upstream 0.5kb upstream 500 false Chr10: 1791121-1791620 Brachypodium stacei
Brast10G029000 0.5kb downstream 0.5kb downstream 1697 true Chr10: 1789424-1791120 Brachypodium stacei
Brast10G029000 0.5kb downstream 0.5kb downstream 500 false Chr10: 1789424-1789923 Brachypodium stacei
Brast10G029000 1.0kb upstream 1.0kb upstream 2197 true Chr10: 1789924-1792120 Brachypodium stacei
Brast10G029000 1.0kb upstream 1.0kb upstream 1000 false Chr10: 1791121-1792120 Brachypodium stacei
Brast10G029000 1.0kb downstream 1.0kb downstream 2197 true Chr10: 1788924-1791120 Brachypodium stacei
Brast10G029000 1.0kb downstream 1.0kb downstream 1000 false Chr10: 1788924-1789923 Brachypodium stacei
Brast10G029000 2.0kb upstream 2.0kb upstream 3197 true Chr10: 1789924-1793120 Brachypodium stacei
Brast10G029000 2.0kb upstream 2.0kb upstream 2000 false Chr10: 1791121-1793120 Brachypodium stacei
Brast10G029000 2.0kb downstream 2.0kb downstream 3197 true Chr10: 1787924-1791120 Brachypodium stacei
Brast10G029000 2.0kb downstream 2.0kb downstream 2000 false Chr10: 1787924-1789923 Brachypodium stacei
Brast10G029000 5.0kb upstream 5.0kb upstream 6197 true Chr10: 1789924-1796120 Brachypodium stacei
Brast10G029000 5.0kb upstream 5.0kb upstream 5000 false Chr10: 1791121-1796120 Brachypodium stacei
Brast10G029000 5.0kb downstream 5.0kb downstream 6197 true Chr10: 1784924-1791120 Brachypodium stacei
Brast10G029000 5.0kb downstream 5.0kb downstream 5000 false Chr10: 1784924-1789923 Brachypodium stacei
Brast10G029000 10.0kb upstream 10.0kb upstream 11197 true Chr10: 1789924-1801120 Brachypodium stacei
Brast10G029000 10.0kb upstream 10.0kb upstream 10000 false Chr10: 1791121-1801120 Brachypodium stacei
Brast10G029000 10.0kb downstream 10.0kb downstream 11197 true Chr10: 1779924-1791120 Brachypodium stacei
Brast10G029000 10.0kb downstream 10.0kb downstream 10000 false Chr10: 1779924-1789923 Brachypodium stacei

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581748 5269 Grass View MSA
122049358 5273 Angiosperm View MSA
121344647 5274 Embryophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain