Gene : Vocar.0001s0673 V. carteri v2.1

Defline:  (1 of 1) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Description:  aconitate hydratase (EC 4.2.1.3), mitochondrial; citrate hydro-lyase; aconitase.
Genomic Order:  673 Name:  ? Vocar.0001s0673
Secondary Identifier:  ? PAC:32884912

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri GLYOXYLATE-BYPASS Volvox carteri pathologic  
Vcarteri PWY-5464 Volvox carteri pathologic  
Vcarteri PWY-561 Volvox carteri pathologic  
Vcarteri PWY-5690 Volvox carteri pathologic  
Vcarteri PWY-6549 Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0001s0673 0.5kb upstream 0.5kb upstream 6976 true scaffold_1: 5278505-5285480 Volvox carteri
Vocar.0001s0673 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 5278505-5279004 Volvox carteri
Vocar.0001s0673 0.5kb downstream 0.5kb downstream 6976 true scaffold_1: 5279005-5285980 Volvox carteri
Vocar.0001s0673 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 5285481-5285980 Volvox carteri
Vocar.0001s0673 1.0kb upstream 1.0kb upstream 7476 true scaffold_1: 5278005-5285480 Volvox carteri
Vocar.0001s0673 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 5278005-5279004 Volvox carteri
Vocar.0001s0673 1.0kb downstream 1.0kb downstream 7476 true scaffold_1: 5279005-5286480 Volvox carteri
Vocar.0001s0673 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 5285481-5286480 Volvox carteri
Vocar.0001s0673 2.0kb upstream 2.0kb upstream 8476 true scaffold_1: 5277005-5285480 Volvox carteri
Vocar.0001s0673 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 5277005-5279004 Volvox carteri
Vocar.0001s0673 2.0kb downstream 2.0kb downstream 8476 true scaffold_1: 5279005-5287480 Volvox carteri
Vocar.0001s0673 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 5285481-5287480 Volvox carteri
Vocar.0001s0673 5.0kb upstream 5.0kb upstream 11476 true scaffold_1: 5274005-5285480 Volvox carteri
Vocar.0001s0673 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 5274005-5279004 Volvox carteri
Vocar.0001s0673 5.0kb downstream 5.0kb downstream 11476 true scaffold_1: 5279005-5290480 Volvox carteri
Vocar.0001s0673 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 5285481-5290480 Volvox carteri
Vocar.0001s0673 10.0kb upstream 10.0kb upstream 16476 true scaffold_1: 5269005-5285480 Volvox carteri
Vocar.0001s0673 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 5269005-5279004 Volvox carteri
Vocar.0001s0673 10.0kb downstream 10.0kb downstream 16476 true scaffold_1: 5279005-5295480 Volvox carteri
Vocar.0001s0673 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 5285481-5295480 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108418 5260 Chlorophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain