Gene : Vocar.0001s0429 V. carteri v2.1

Defline:  (1 of 1) PTHR30239 - ACETOLACTATE SYNTHASE III, REGULATORY SUBUNIT Genomic Order:  429
Name:  ? Vocar.0001s0429 Secondary Identifier:  ? PAC:32884352

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri BRANCHED-CHAIN-AA-SYN-PWY Volvox carteri pathologic  
Vcarteri ILEUSYN-PWY Volvox carteri pathologic  
Vcarteri PWY-3001 Volvox carteri pathologic  
Vcarteri VALSYN-PWY Volvox carteri pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0001s0429 0.5kb upstream 0.5kb upstream 6993 true scaffold_1: 3396446-3403438 Volvox carteri
Vocar.0001s0429 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 3396446-3396945 Volvox carteri
Vocar.0001s0429 0.5kb downstream 0.5kb downstream 6993 true scaffold_1: 3396946-3403938 Volvox carteri
Vocar.0001s0429 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 3403439-3403938 Volvox carteri
Vocar.0001s0429 1.0kb upstream 1.0kb upstream 7493 true scaffold_1: 3395946-3403438 Volvox carteri
Vocar.0001s0429 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 3395946-3396945 Volvox carteri
Vocar.0001s0429 1.0kb downstream 1.0kb downstream 7493 true scaffold_1: 3396946-3404438 Volvox carteri
Vocar.0001s0429 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 3403439-3404438 Volvox carteri
Vocar.0001s0429 2.0kb upstream 2.0kb upstream 8493 true scaffold_1: 3394946-3403438 Volvox carteri
Vocar.0001s0429 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 3394946-3396945 Volvox carteri
Vocar.0001s0429 2.0kb downstream 2.0kb downstream 8493 true scaffold_1: 3396946-3405438 Volvox carteri
Vocar.0001s0429 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 3403439-3405438 Volvox carteri
Vocar.0001s0429 5.0kb upstream 5.0kb upstream 11493 true scaffold_1: 3391946-3403438 Volvox carteri
Vocar.0001s0429 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 3391946-3396945 Volvox carteri
Vocar.0001s0429 5.0kb downstream 5.0kb downstream 11493 true scaffold_1: 3396946-3408438 Volvox carteri
Vocar.0001s0429 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 3403439-3408438 Volvox carteri
Vocar.0001s0429 10.0kb upstream 10.0kb upstream 16493 true scaffold_1: 3386946-3403438 Volvox carteri
Vocar.0001s0429 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 3386946-3396945 Volvox carteri
Vocar.0001s0429 10.0kb downstream 10.0kb downstream 16493 true scaffold_1: 3396946-3413438 Volvox carteri
Vocar.0001s0429 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 3403439-3413438 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108986 5260 Chlorophyte View MSA
123426079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain