Gene : Vocar.0001s1160 V. carteri v2.1
Defline:  (1 of 16) PF00686 - Starch binding domain (CBM_20) Genomic Order:  1160
Name:  ? Vocar.0001s1160 Secondary Identifier:  ? PAC:32885421
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-6724 Volvox carteri pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0001s1160 0.5kb upstream 0.5kb upstream 3910 true scaffold_1: 9003084-9006993 Volvox carteri
Vocar.0001s1160 0.5kb upstream 0.5kb upstream 500 false scaffold_1: 9006494-9006993 Volvox carteri
Vocar.0001s1160 0.5kb downstream 0.5kb downstream 3910 true scaffold_1: 9002584-9006493 Volvox carteri
Vocar.0001s1160 0.5kb downstream 0.5kb downstream 500 false scaffold_1: 9002584-9003083 Volvox carteri
Vocar.0001s1160 1.0kb upstream 1.0kb upstream 4410 true scaffold_1: 9003084-9007493 Volvox carteri
Vocar.0001s1160 1.0kb upstream 1.0kb upstream 1000 false scaffold_1: 9006494-9007493 Volvox carteri
Vocar.0001s1160 1.0kb downstream 1.0kb downstream 4410 true scaffold_1: 9002084-9006493 Volvox carteri
Vocar.0001s1160 1.0kb downstream 1.0kb downstream 1000 false scaffold_1: 9002084-9003083 Volvox carteri
Vocar.0001s1160 2.0kb upstream 2.0kb upstream 5410 true scaffold_1: 9003084-9008493 Volvox carteri
Vocar.0001s1160 2.0kb upstream 2.0kb upstream 2000 false scaffold_1: 9006494-9008493 Volvox carteri
Vocar.0001s1160 2.0kb downstream 2.0kb downstream 5410 true scaffold_1: 9001084-9006493 Volvox carteri
Vocar.0001s1160 2.0kb downstream 2.0kb downstream 2000 false scaffold_1: 9001084-9003083 Volvox carteri
Vocar.0001s1160 5.0kb upstream 5.0kb upstream 8410 true scaffold_1: 9003084-9011493 Volvox carteri
Vocar.0001s1160 5.0kb upstream 5.0kb upstream 5000 false scaffold_1: 9006494-9011493 Volvox carteri
Vocar.0001s1160 5.0kb downstream 5.0kb downstream 8410 true scaffold_1: 8998084-9006493 Volvox carteri
Vocar.0001s1160 5.0kb downstream 5.0kb downstream 5000 false scaffold_1: 8998084-9003083 Volvox carteri
Vocar.0001s1160 10.0kb upstream 10.0kb upstream 13410 true scaffold_1: 9003084-9016493 Volvox carteri
Vocar.0001s1160 10.0kb upstream 10.0kb upstream 10000 false scaffold_1: 9006494-9016493 Volvox carteri
Vocar.0001s1160 10.0kb downstream 10.0kb downstream 13410 true scaffold_1: 8993084-9006493 Volvox carteri
Vocar.0001s1160 10.0kb downstream 10.0kb downstream 10000 false scaffold_1: 8993084-9003083 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111785 5260 Chlorophyte View MSA
123429164 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain