Gene : Vocar.0014s0190 V. carteri v2.1
Defline:  (1 of 2) 4.2.3.5 - Chorismate synthase / 5-enolpyruvylshikimate-3-phosphate phospholyase Genomic Order:  190
Name:  ? Vocar.0014s0190 Secondary Identifier:  ? PAC:32888564
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri ARO-PWY Volvox carteri pathologic  
Vcarteri PWY-6163 Volvox carteri pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0014s0190 0.5kb upstream 0.5kb upstream 5875 true scaffold_14: 1538718-1544592 Volvox carteri
Vocar.0014s0190 0.5kb upstream 0.5kb upstream 500 false scaffold_14: 1538718-1539217 Volvox carteri
Vocar.0014s0190 0.5kb downstream 0.5kb downstream 5875 true scaffold_14: 1539218-1545092 Volvox carteri
Vocar.0014s0190 0.5kb downstream 0.5kb downstream 500 false scaffold_14: 1544593-1545092 Volvox carteri
Vocar.0014s0190 1.0kb upstream 1.0kb upstream 6375 true scaffold_14: 1538218-1544592 Volvox carteri
Vocar.0014s0190 1.0kb upstream 1.0kb upstream 1000 false scaffold_14: 1538218-1539217 Volvox carteri
Vocar.0014s0190 1.0kb downstream 1.0kb downstream 6375 true scaffold_14: 1539218-1545592 Volvox carteri
Vocar.0014s0190 1.0kb downstream 1.0kb downstream 1000 false scaffold_14: 1544593-1545592 Volvox carteri
Vocar.0014s0190 2.0kb upstream 2.0kb upstream 7375 true scaffold_14: 1537218-1544592 Volvox carteri
Vocar.0014s0190 2.0kb upstream 2.0kb upstream 2000 false scaffold_14: 1537218-1539217 Volvox carteri
Vocar.0014s0190 2.0kb downstream 2.0kb downstream 7375 true scaffold_14: 1539218-1546592 Volvox carteri
Vocar.0014s0190 2.0kb downstream 2.0kb downstream 2000 false scaffold_14: 1544593-1546592 Volvox carteri
Vocar.0014s0190 5.0kb upstream 5.0kb upstream 10375 true scaffold_14: 1534218-1544592 Volvox carteri
Vocar.0014s0190 5.0kb upstream 5.0kb upstream 5000 false scaffold_14: 1534218-1539217 Volvox carteri
Vocar.0014s0190 5.0kb downstream 5.0kb downstream 10375 true scaffold_14: 1539218-1549592 Volvox carteri
Vocar.0014s0190 5.0kb downstream 5.0kb downstream 5000 false scaffold_14: 1544593-1549592 Volvox carteri
Vocar.0014s0190 10.0kb upstream 10.0kb upstream 15375 true scaffold_14: 1529218-1544592 Volvox carteri
Vocar.0014s0190 10.0kb upstream 10.0kb upstream 10000 false scaffold_14: 1529218-1539217 Volvox carteri
Vocar.0014s0190 10.0kb downstream 10.0kb downstream 15375 true scaffold_14: 1539218-1554592 Volvox carteri
Vocar.0014s0190 10.0kb downstream 10.0kb downstream 10000 false scaffold_14: 1544593-1554592 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110609 5260 Chlorophyte View MSA
123428194 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain