Gene : Vocar.0002s0002 V. carteri v2.1

Defline:  (1 of 1) K03267 - peptide chain release factor subunit 3 (ERF3, GSPT) Description:  elongation factor-like protein; similar to yeast Hbs1p, which plays a role in nonsense-mediated decay.
Genomic Order:  2 Name:  ? Vocar.0002s0002
Secondary Identifier:  ? PAC:32890872

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0002s0002 0.5kb upstream 0.5kb upstream 8871 true scaffold_2: 73768-82638 Volvox carteri
Vocar.0002s0002 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 82139-82638 Volvox carteri
Vocar.0002s0002 0.5kb downstream 0.5kb downstream 8871 true scaffold_2: 73268-82138 Volvox carteri
Vocar.0002s0002 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 73268-73767 Volvox carteri
Vocar.0002s0002 1.0kb upstream 1.0kb upstream 9371 true scaffold_2: 73768-83138 Volvox carteri
Vocar.0002s0002 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 82139-83138 Volvox carteri
Vocar.0002s0002 1.0kb downstream 1.0kb downstream 9371 true scaffold_2: 72768-82138 Volvox carteri
Vocar.0002s0002 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 72768-73767 Volvox carteri
Vocar.0002s0002 2.0kb upstream 2.0kb upstream 10371 true scaffold_2: 73768-84138 Volvox carteri
Vocar.0002s0002 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 82139-84138 Volvox carteri
Vocar.0002s0002 2.0kb downstream 2.0kb downstream 10371 true scaffold_2: 71768-82138 Volvox carteri
Vocar.0002s0002 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 71768-73767 Volvox carteri
Vocar.0002s0002 5.0kb upstream 5.0kb upstream 13371 true scaffold_2: 73768-87138 Volvox carteri
Vocar.0002s0002 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 82139-87138 Volvox carteri
Vocar.0002s0002 5.0kb downstream 5.0kb downstream 13371 true scaffold_2: 68768-82138 Volvox carteri
Vocar.0002s0002 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 68768-73767 Volvox carteri
Vocar.0002s0002 10.0kb upstream 10.0kb upstream 18371 true scaffold_2: 73768-92138 Volvox carteri
Vocar.0002s0002 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 82139-92138 Volvox carteri
Vocar.0002s0002 10.0kb downstream 10.0kb downstream 18371 true scaffold_2: 63768-82138 Volvox carteri
Vocar.0002s0002 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 63768-73767 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109394 5260 Chlorophyte View MSA
123423812 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain