Gene : Vocar.0002s0047 V. carteri v2.1
Defline:  (1 of 30) PTHR21649//PTHR21649:SF8 - CHLOROPHYLL A/B BINDING PROTEIN Genomic Order:  47
Name:  ? Vocar.0002s0047 Secondary Identifier:  ? PAC:32891068
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PHOTOALL-PWY Volvox carteri pathologic  
Vcarteri PWY-101 Volvox carteri pathologic  
Vcarteri PWY-7731 Volvox carteri pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0002s0047 0.5kb upstream 0.5kb upstream 10186 true scaffold_2: 301370-311555 Volvox carteri
Vocar.0002s0047 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 311056-311555 Volvox carteri
Vocar.0002s0047 0.5kb downstream 0.5kb downstream 10186 true scaffold_2: 300870-311055 Volvox carteri
Vocar.0002s0047 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 300870-301369 Volvox carteri
Vocar.0002s0047 1.0kb upstream 1.0kb upstream 10686 true scaffold_2: 301370-312055 Volvox carteri
Vocar.0002s0047 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 311056-312055 Volvox carteri
Vocar.0002s0047 1.0kb downstream 1.0kb downstream 10686 true scaffold_2: 300370-311055 Volvox carteri
Vocar.0002s0047 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 300370-301369 Volvox carteri
Vocar.0002s0047 2.0kb upstream 2.0kb upstream 11686 true scaffold_2: 301370-313055 Volvox carteri
Vocar.0002s0047 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 311056-313055 Volvox carteri
Vocar.0002s0047 2.0kb downstream 2.0kb downstream 11686 true scaffold_2: 299370-311055 Volvox carteri
Vocar.0002s0047 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 299370-301369 Volvox carteri
Vocar.0002s0047 5.0kb upstream 5.0kb upstream 14686 true scaffold_2: 301370-316055 Volvox carteri
Vocar.0002s0047 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 311056-316055 Volvox carteri
Vocar.0002s0047 5.0kb downstream 5.0kb downstream 14686 true scaffold_2: 296370-311055 Volvox carteri
Vocar.0002s0047 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 296370-301369 Volvox carteri
Vocar.0002s0047 10.0kb upstream 10.0kb upstream 19686 true scaffold_2: 301370-321055 Volvox carteri
Vocar.0002s0047 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 311056-321055 Volvox carteri
Vocar.0002s0047 10.0kb downstream 10.0kb downstream 19686 true scaffold_2: 291370-311055 Volvox carteri
Vocar.0002s0047 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 291370-301369 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124113612 5260 Chlorophyte View MSA
123426313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain