Gene : Vocar.0022s0052 V. carteri v2.1
Defline:  (1 of 1) K16535 - lisH domain-containing protein FOPNL (FOPNL, FOR20) Description:  very similar to C. reinhardtii V3.0 protein 192763, identified by comparative genomics as being present only in organisms having motile cilia.
Genomic Order:  52 Name:  ? Vocar.0022s0052
Secondary Identifier:  ? PAC:32891882
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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0022s0052 0.5kb upstream 0.5kb upstream 2180 true scaffold_22: 602272-604451 Volvox carteri
Vocar.0022s0052 0.5kb upstream 0.5kb upstream 500 false scaffold_22: 602272-602771 Volvox carteri
Vocar.0022s0052 0.5kb downstream 0.5kb downstream 2180 true scaffold_22: 602772-604951 Volvox carteri
Vocar.0022s0052 0.5kb downstream 0.5kb downstream 500 false scaffold_22: 604452-604951 Volvox carteri
Vocar.0022s0052 1.0kb upstream 1.0kb upstream 2680 true scaffold_22: 601772-604451 Volvox carteri
Vocar.0022s0052 1.0kb upstream 1.0kb upstream 1000 false scaffold_22: 601772-602771 Volvox carteri
Vocar.0022s0052 1.0kb downstream 1.0kb downstream 2680 true scaffold_22: 602772-605451 Volvox carteri
Vocar.0022s0052 1.0kb downstream 1.0kb downstream 1000 false scaffold_22: 604452-605451 Volvox carteri
Vocar.0022s0052 2.0kb upstream 2.0kb upstream 3680 true scaffold_22: 600772-604451 Volvox carteri
Vocar.0022s0052 2.0kb upstream 2.0kb upstream 2000 false scaffold_22: 600772-602771 Volvox carteri
Vocar.0022s0052 2.0kb downstream 2.0kb downstream 3680 true scaffold_22: 602772-606451 Volvox carteri
Vocar.0022s0052 2.0kb downstream 2.0kb downstream 2000 false scaffold_22: 604452-606451 Volvox carteri
Vocar.0022s0052 5.0kb upstream 5.0kb upstream 6680 true scaffold_22: 597772-604451 Volvox carteri
Vocar.0022s0052 5.0kb upstream 5.0kb upstream 5000 false scaffold_22: 597772-602771 Volvox carteri
Vocar.0022s0052 5.0kb downstream 5.0kb downstream 6680 true scaffold_22: 602772-609451 Volvox carteri
Vocar.0022s0052 5.0kb downstream 5.0kb downstream 5000 false scaffold_22: 604452-609451 Volvox carteri
Vocar.0022s0052 10.0kb upstream 10.0kb upstream 11680 true scaffold_22: 592772-604451 Volvox carteri
Vocar.0022s0052 10.0kb upstream 10.0kb upstream 10000 false scaffold_22: 592772-602771 Volvox carteri
Vocar.0022s0052 10.0kb downstream 10.0kb downstream 11680 true scaffold_22: 602772-614451 Volvox carteri
Vocar.0022s0052 10.0kb downstream 10.0kb downstream 10000 false scaffold_22: 604452-614451 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109331 5260 Chlorophyte View MSA
123427714 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain