Gene : Vocar.0032s0139 V. carteri v2.1
Defline:  (1 of 1) K03689 - cytochrome b6-f complex subunit 8 (petN) Description:  gonidia-specific cDNA G37; PMID:10654090. cytochrome b6f complex; subunit PetN; chloroplast targeted; (The Chlamydomonas ortholog is called: PETN).
Genomic Order:  139 Name:  ? Vocar.0032s0139
Secondary Identifier:  ? PAC:32893855
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PHOTOALL-PWY Volvox carteri pathologic  
Vcarteri PWY-101 Volvox carteri pathologic  
Vcarteri PWY-7731 Volvox carteri pathologic  

Genomics

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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0032s0139 0.5kb upstream 0.5kb upstream 1943 true scaffold_32: 1305503-1307445 Volvox carteri
Vocar.0032s0139 0.5kb upstream 0.5kb upstream 500 false scaffold_32: 1306946-1307445 Volvox carteri
Vocar.0032s0139 0.5kb downstream 0.5kb downstream 1943 true scaffold_32: 1305003-1306945 Volvox carteri
Vocar.0032s0139 0.5kb downstream 0.5kb downstream 500 false scaffold_32: 1305003-1305502 Volvox carteri
Vocar.0032s0139 1.0kb upstream 1.0kb upstream 2443 true scaffold_32: 1305503-1307945 Volvox carteri
Vocar.0032s0139 1.0kb upstream 1.0kb upstream 1000 false scaffold_32: 1306946-1307945 Volvox carteri
Vocar.0032s0139 1.0kb downstream 1.0kb downstream 2443 true scaffold_32: 1304503-1306945 Volvox carteri
Vocar.0032s0139 1.0kb downstream 1.0kb downstream 1000 false scaffold_32: 1304503-1305502 Volvox carteri
Vocar.0032s0139 2.0kb upstream 2.0kb upstream 3443 true scaffold_32: 1305503-1308945 Volvox carteri
Vocar.0032s0139 2.0kb upstream 2.0kb upstream 2000 false scaffold_32: 1306946-1308945 Volvox carteri
Vocar.0032s0139 2.0kb downstream 2.0kb downstream 3443 true scaffold_32: 1303503-1306945 Volvox carteri
Vocar.0032s0139 2.0kb downstream 2.0kb downstream 2000 false scaffold_32: 1303503-1305502 Volvox carteri
Vocar.0032s0139 5.0kb upstream 5.0kb upstream 6443 true scaffold_32: 1305503-1311945 Volvox carteri
Vocar.0032s0139 5.0kb upstream 5.0kb upstream 5000 false scaffold_32: 1306946-1311945 Volvox carteri
Vocar.0032s0139 5.0kb downstream 5.0kb downstream 6443 true scaffold_32: 1300503-1306945 Volvox carteri
Vocar.0032s0139 5.0kb downstream 5.0kb downstream 5000 false scaffold_32: 1300503-1305502 Volvox carteri
Vocar.0032s0139 10.0kb upstream 10.0kb upstream 11443 true scaffold_32: 1305503-1316945 Volvox carteri
Vocar.0032s0139 10.0kb upstream 10.0kb upstream 10000 false scaffold_32: 1306946-1316945 Volvox carteri
Vocar.0032s0139 10.0kb downstream 10.0kb downstream 11443 true scaffold_32: 1295503-1306945 Volvox carteri
Vocar.0032s0139 10.0kb downstream 10.0kb downstream 10000 false scaffold_32: 1295503-1305502 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110337 5260 Chlorophyte View MSA
123427633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain