Gene : Vocar.0036s0053 V. carteri v2.1
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  53
Name:  ? Vocar.0036s0053 Secondary Identifier:  ? PAC:32892276
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri PWY-6689 Volvox carteri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0036s0053 0.5kb upstream 0.5kb upstream 5975 true scaffold_36: 438325-444299 Volvox carteri
Vocar.0036s0053 0.5kb upstream 0.5kb upstream 500 false scaffold_36: 443800-444299 Volvox carteri
Vocar.0036s0053 0.5kb downstream 0.5kb downstream 5975 true scaffold_36: 437825-443799 Volvox carteri
Vocar.0036s0053 0.5kb downstream 0.5kb downstream 500 false scaffold_36: 437825-438324 Volvox carteri
Vocar.0036s0053 1.0kb upstream 1.0kb upstream 6475 true scaffold_36: 438325-444799 Volvox carteri
Vocar.0036s0053 1.0kb upstream 1.0kb upstream 1000 false scaffold_36: 443800-444799 Volvox carteri
Vocar.0036s0053 1.0kb downstream 1.0kb downstream 6475 true scaffold_36: 437325-443799 Volvox carteri
Vocar.0036s0053 1.0kb downstream 1.0kb downstream 1000 false scaffold_36: 437325-438324 Volvox carteri
Vocar.0036s0053 2.0kb upstream 2.0kb upstream 7475 true scaffold_36: 438325-445799 Volvox carteri
Vocar.0036s0053 2.0kb upstream 2.0kb upstream 2000 false scaffold_36: 443800-445799 Volvox carteri
Vocar.0036s0053 2.0kb downstream 2.0kb downstream 7475 true scaffold_36: 436325-443799 Volvox carteri
Vocar.0036s0053 2.0kb downstream 2.0kb downstream 2000 false scaffold_36: 436325-438324 Volvox carteri
Vocar.0036s0053 5.0kb upstream 5.0kb upstream 10475 true scaffold_36: 438325-448799 Volvox carteri
Vocar.0036s0053 5.0kb upstream 5.0kb upstream 5000 false scaffold_36: 443800-448799 Volvox carteri
Vocar.0036s0053 5.0kb downstream 5.0kb downstream 10475 true scaffold_36: 433325-443799 Volvox carteri
Vocar.0036s0053 5.0kb downstream 5.0kb downstream 5000 false scaffold_36: 433325-438324 Volvox carteri
Vocar.0036s0053 10.0kb upstream 10.0kb upstream 15475 true scaffold_36: 438325-453799 Volvox carteri
Vocar.0036s0053 10.0kb upstream 10.0kb upstream 10000 false scaffold_36: 443800-453799 Volvox carteri
Vocar.0036s0053 10.0kb downstream 10.0kb downstream 15475 true scaffold_36: 428325-443799 Volvox carteri
Vocar.0036s0053 10.0kb downstream 10.0kb downstream 10000 false scaffold_36: 428325-438324 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111307 5260 Chlorophyte View MSA
123429143 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain