Gene : Vocar.0042s0029 V. carteri v2.1
Defline:  (1 of 1) 1.1.1.25 - Shikimate dehydrogenase / Shikimate:NADP(+) oxidoreductase Genomic Order:  29
Name:  ? Vocar.0042s0029 Secondary Identifier:  ? PAC:32892020
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri ARO-PWY Volvox carteri pathologic  
Vcarteri PWY-6163 Volvox carteri pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0042s0029 0.5kb upstream 0.5kb upstream 6719 true scaffold_42: 184256-190974 Volvox carteri
Vocar.0042s0029 0.5kb upstream 0.5kb upstream 500 false scaffold_42: 184256-184755 Volvox carteri
Vocar.0042s0029 0.5kb downstream 0.5kb downstream 6719 true scaffold_42: 184756-191474 Volvox carteri
Vocar.0042s0029 0.5kb downstream 0.5kb downstream 500 false scaffold_42: 190975-191474 Volvox carteri
Vocar.0042s0029 1.0kb upstream 1.0kb upstream 7219 true scaffold_42: 183756-190974 Volvox carteri
Vocar.0042s0029 1.0kb upstream 1.0kb upstream 1000 false scaffold_42: 183756-184755 Volvox carteri
Vocar.0042s0029 1.0kb downstream 1.0kb downstream 7219 true scaffold_42: 184756-191974 Volvox carteri
Vocar.0042s0029 1.0kb downstream 1.0kb downstream 1000 false scaffold_42: 190975-191974 Volvox carteri
Vocar.0042s0029 2.0kb upstream 2.0kb upstream 8219 true scaffold_42: 182756-190974 Volvox carteri
Vocar.0042s0029 2.0kb upstream 2.0kb upstream 2000 false scaffold_42: 182756-184755 Volvox carteri
Vocar.0042s0029 2.0kb downstream 2.0kb downstream 8219 true scaffold_42: 184756-192974 Volvox carteri
Vocar.0042s0029 2.0kb downstream 2.0kb downstream 2000 false scaffold_42: 190975-192974 Volvox carteri
Vocar.0042s0029 5.0kb upstream 5.0kb upstream 11219 true scaffold_42: 179756-190974 Volvox carteri
Vocar.0042s0029 5.0kb upstream 5.0kb upstream 5000 false scaffold_42: 179756-184755 Volvox carteri
Vocar.0042s0029 5.0kb downstream 5.0kb downstream 11219 true scaffold_42: 184756-195974 Volvox carteri
Vocar.0042s0029 5.0kb downstream 5.0kb downstream 5000 false scaffold_42: 190975-195974 Volvox carteri
Vocar.0042s0029 10.0kb upstream 10.0kb upstream 16219 true scaffold_42: 174756-190974 Volvox carteri
Vocar.0042s0029 10.0kb upstream 10.0kb upstream 10000 false scaffold_42: 174756-184755 Volvox carteri
Vocar.0042s0029 10.0kb downstream 10.0kb downstream 16219 true scaffold_42: 184756-200974 Volvox carteri
Vocar.0042s0029 10.0kb downstream 10.0kb downstream 10000 false scaffold_42: 190975-200974 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124109656 5260 Chlorophyte View MSA
123427556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain