Gene : Vocar.0008s0027 V. carteri v2.1
Defline:  (1 of 2) 6.1.1.21 - Histidine--tRNA ligase / Histidyl-tRNA synthetase Genomic Order:  27
Name:  ? Vocar.0008s0027 Secondary Identifier:  ? PAC:32897129
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Vcarteri TRNA-CHARGING-PWY Volvox carteri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Vocar.0008s0027 0.5kb upstream 0.5kb upstream 13372 true scaffold_8: 297941-311312 Volvox carteri
Vocar.0008s0027 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 297941-298440 Volvox carteri
Vocar.0008s0027 0.5kb downstream 0.5kb downstream 13372 true scaffold_8: 298441-311812 Volvox carteri
Vocar.0008s0027 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 311313-311812 Volvox carteri
Vocar.0008s0027 1.0kb upstream 1.0kb upstream 13872 true scaffold_8: 297441-311312 Volvox carteri
Vocar.0008s0027 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 297441-298440 Volvox carteri
Vocar.0008s0027 1.0kb downstream 1.0kb downstream 13872 true scaffold_8: 298441-312312 Volvox carteri
Vocar.0008s0027 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 311313-312312 Volvox carteri
Vocar.0008s0027 2.0kb upstream 2.0kb upstream 14872 true scaffold_8: 296441-311312 Volvox carteri
Vocar.0008s0027 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 296441-298440 Volvox carteri
Vocar.0008s0027 2.0kb downstream 2.0kb downstream 14872 true scaffold_8: 298441-313312 Volvox carteri
Vocar.0008s0027 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 311313-313312 Volvox carteri
Vocar.0008s0027 5.0kb upstream 5.0kb upstream 17872 true scaffold_8: 293441-311312 Volvox carteri
Vocar.0008s0027 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 293441-298440 Volvox carteri
Vocar.0008s0027 5.0kb downstream 5.0kb downstream 17872 true scaffold_8: 298441-316312 Volvox carteri
Vocar.0008s0027 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 311313-316312 Volvox carteri
Vocar.0008s0027 10.0kb upstream 10.0kb upstream 22872 true scaffold_8: 288441-311312 Volvox carteri
Vocar.0008s0027 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 288441-298440 Volvox carteri
Vocar.0008s0027 10.0kb downstream 10.0kb downstream 22872 true scaffold_8: 298441-321312 Volvox carteri
Vocar.0008s0027 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 311313-321312 Volvox carteri

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111567 5260 Chlorophyte View MSA
123427860 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain