PhytoMine: Gene Vocar.0007s0377 V. carteri v2.1

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2 Synonyms

20 Flanking Regions

Region Name	Flank Size	Direction	Length	Gene Included?	Chromosome Location	Organism Name
Vocar.0007s0377 0.5kb upstream	0.5kb	upstream	17604	true	scaffold_7: 3051069-3068672	Volvox carteri
Vocar.0007s0377 0.5kb upstream	0.5kb	upstream	500	false	scaffold_7: 3068173-3068672	Volvox carteri
Vocar.0007s0377 0.5kb downstream	0.5kb	downstream	17604	true	scaffold_7: 3050569-3068172	Volvox carteri
Vocar.0007s0377 0.5kb downstream	0.5kb	downstream	500	false	scaffold_7: 3050569-3051068	Volvox carteri
Vocar.0007s0377 1.0kb upstream	1.0kb	upstream	18104	true	scaffold_7: 3051069-3069172	Volvox carteri
Vocar.0007s0377 1.0kb upstream	1.0kb	upstream	1000	false	scaffold_7: 3068173-3069172	Volvox carteri
Vocar.0007s0377 1.0kb downstream	1.0kb	downstream	18104	true	scaffold_7: 3050069-3068172	Volvox carteri
Vocar.0007s0377 1.0kb downstream	1.0kb	downstream	1000	false	scaffold_7: 3050069-3051068	Volvox carteri
Vocar.0007s0377 2.0kb upstream	2.0kb	upstream	19104	true	scaffold_7: 3051069-3070172	Volvox carteri
Vocar.0007s0377 2.0kb upstream	2.0kb	upstream	2000	false	scaffold_7: 3068173-3070172	Volvox carteri
Vocar.0007s0377 2.0kb downstream	2.0kb	downstream	19104	true	scaffold_7: 3049069-3068172	Volvox carteri
Vocar.0007s0377 2.0kb downstream	2.0kb	downstream	2000	false	scaffold_7: 3049069-3051068	Volvox carteri
Vocar.0007s0377 5.0kb upstream	5.0kb	upstream	22104	true	scaffold_7: 3051069-3073172	Volvox carteri
Vocar.0007s0377 5.0kb upstream	5.0kb	upstream	5000	false	scaffold_7: 3068173-3073172	Volvox carteri
Vocar.0007s0377 5.0kb downstream	5.0kb	downstream	22104	true	scaffold_7: 3046069-3068172	Volvox carteri
Vocar.0007s0377 5.0kb downstream	5.0kb	downstream	5000	false	scaffold_7: 3046069-3051068	Volvox carteri
Vocar.0007s0377 10.0kb upstream	10.0kb	upstream	27104	true	scaffold_7: 3051069-3078172	Volvox carteri
Vocar.0007s0377 10.0kb upstream	10.0kb	upstream	10000	false	scaffold_7: 3068173-3078172	Volvox carteri
Vocar.0007s0377 10.0kb downstream	10.0kb	downstream	27104	true	scaffold_7: 3041069-3068172	Volvox carteri
Vocar.0007s0377 10.0kb downstream	10.0kb	downstream	10000	false	scaffold_7: 3041069-3051068	Volvox carteri

2 Protein Familys

Cluster ID	Method ID	Method Name	Sequence Alignment
124110080	5260	Chlorophyte	View MSA
123428270	5275	Viridiplantae	View MSA

Defline:	(1 of 1) PTHR12975 - TRANSPORT PROTEIN TRAPP	Genomic Order:	377
Name:	Vocar.0007s0377	Secondary Identifier:	PAC:32888118

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Message:	---- Current page: ---- /phytomine/report.do?id=1821093347 ---- Current query: ---- <query name="" model="genomic" view="GeneFlankingRegion.gene.primaryIdentifier GeneFlankingRegion.gene.briefDescription GeneFlankingRegion.gene.organism.shortName GeneFlankingRegion.gene.symbol GeneFlankingRegion.gene.length GeneFlankingRegion.gene.chromosome.primaryIdentifier GeneFlankingRegion.gene.chromosomeLocation.start GeneFlankingRegion.gene.chromosomeLocation.end" longDescription=""><join path="GeneFlankingRegion.gene.organism" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosome" style="OUTER"/><join path="GeneFlankingRegion.gene.chromosomeLocation" style="OUTER"/><constraint path="GeneFlankingRegion.id" op="=" value="-1827299192"/></query>

Gene : Vocar.0007s0377 V. carteri v2.1

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Sequence Feature Displayer

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2 Synonyms

20 Flanking Regions

2 Protein Familys

0 Rna Seq Expressions

0 Strain