Gene : Traes_1DS_676316D07 T. aestivum v2.2
Defline:  (1 of 115) PF00421 - Photosystem II protein (PSII) Genomic Order:  1
Name:  ? Traes_1DS_676316D07 Secondary Identifier:  ? PAC:31880381
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_1DS_676316D07 0.5kb upstream 0.5kb upstream 1561 true ta_iwgsc_1ds_v1_1902000: 1-1561 Triticum aestivum
Traes_1DS_676316D07 0.5kb upstream 0.5kb upstream 187 false ta_iwgsc_1ds_v1_1902000: 1-187 Triticum aestivum
Traes_1DS_676316D07 0.5kb downstream 0.5kb downstream 1874 true ta_iwgsc_1ds_v1_1902000: 188-2061 Triticum aestivum
Traes_1DS_676316D07 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_1ds_v1_1902000: 1562-2061 Triticum aestivum
Traes_1DS_676316D07 1.0kb upstream 1.0kb upstream 1561 true ta_iwgsc_1ds_v1_1902000: 1-1561 Triticum aestivum
Traes_1DS_676316D07 1.0kb upstream 1.0kb upstream 187 false ta_iwgsc_1ds_v1_1902000: 1-187 Triticum aestivum
Traes_1DS_676316D07 1.0kb downstream 1.0kb downstream 2374 true ta_iwgsc_1ds_v1_1902000: 188-2561 Triticum aestivum
Traes_1DS_676316D07 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_1ds_v1_1902000: 1562-2561 Triticum aestivum
Traes_1DS_676316D07 2.0kb upstream 2.0kb upstream 1561 true ta_iwgsc_1ds_v1_1902000: 1-1561 Triticum aestivum
Traes_1DS_676316D07 2.0kb upstream 2.0kb upstream 187 false ta_iwgsc_1ds_v1_1902000: 1-187 Triticum aestivum
Traes_1DS_676316D07 2.0kb downstream 2.0kb downstream 3374 true ta_iwgsc_1ds_v1_1902000: 188-3561 Triticum aestivum
Traes_1DS_676316D07 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_1ds_v1_1902000: 1562-3561 Triticum aestivum
Traes_1DS_676316D07 5.0kb upstream 5.0kb upstream 1561 true ta_iwgsc_1ds_v1_1902000: 1-1561 Triticum aestivum
Traes_1DS_676316D07 5.0kb upstream 5.0kb upstream 187 false ta_iwgsc_1ds_v1_1902000: 1-187 Triticum aestivum
Traes_1DS_676316D07 5.0kb downstream 5.0kb downstream 6374 true ta_iwgsc_1ds_v1_1902000: 188-6561 Triticum aestivum
Traes_1DS_676316D07 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_1ds_v1_1902000: 1562-6561 Triticum aestivum
Traes_1DS_676316D07 10.0kb upstream 10.0kb upstream 1561 true ta_iwgsc_1ds_v1_1902000: 1-1561 Triticum aestivum
Traes_1DS_676316D07 10.0kb upstream 10.0kb upstream 187 false ta_iwgsc_1ds_v1_1902000: 1-187 Triticum aestivum
Traes_1DS_676316D07 10.0kb downstream 10.0kb downstream 9750 true ta_iwgsc_1ds_v1_1902000: 188-9937 Triticum aestivum
Traes_1DS_676316D07 10.0kb downstream 10.0kb downstream 8376 false ta_iwgsc_1ds_v1_1902000: 1562-9937 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121942318 5273 Angiosperm Singleton cluster - no MSA
124515757 5269 Grass Singleton cluster - no MSA
121212811 5274 Embryophyte Singleton cluster - no MSA
123251624 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain