Gene : Traes_3AL_4E621A250 T. aestivum v2.2
Defline:  (1 of 115) PF00421 - Photosystem II protein (PSII) Genomic Order:  2
Name:  ? Traes_3AL_4E621A250 Secondary Identifier:  ? PAC:32004402
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_3AL_4E621A250 0.5kb upstream 0.5kb upstream 1874 true ta_iwgsc_3al_v1_4314503: 1235-3108 Triticum aestivum
Traes_3AL_4E621A250 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_3al_v1_4314503: 1235-1734 Triticum aestivum
Traes_3AL_4E621A250 0.5kb downstream 0.5kb downstream 1874 true ta_iwgsc_3al_v1_4314503: 1735-3608 Triticum aestivum
Traes_3AL_4E621A250 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_3al_v1_4314503: 3109-3608 Triticum aestivum
Traes_3AL_4E621A250 1.0kb upstream 1.0kb upstream 2374 true ta_iwgsc_3al_v1_4314503: 735-3108 Triticum aestivum
Traes_3AL_4E621A250 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_3al_v1_4314503: 735-1734 Triticum aestivum
Traes_3AL_4E621A250 1.0kb downstream 1.0kb downstream 2374 true ta_iwgsc_3al_v1_4314503: 1735-4108 Triticum aestivum
Traes_3AL_4E621A250 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_3al_v1_4314503: 3109-4108 Triticum aestivum
Traes_3AL_4E621A250 2.0kb upstream 2.0kb upstream 3108 true ta_iwgsc_3al_v1_4314503: 1-3108 Triticum aestivum
Traes_3AL_4E621A250 2.0kb upstream 2.0kb upstream 1734 false ta_iwgsc_3al_v1_4314503: 1-1734 Triticum aestivum
Traes_3AL_4E621A250 2.0kb downstream 2.0kb downstream 3374 true ta_iwgsc_3al_v1_4314503: 1735-5108 Triticum aestivum
Traes_3AL_4E621A250 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_3al_v1_4314503: 3109-5108 Triticum aestivum
Traes_3AL_4E621A250 5.0kb upstream 5.0kb upstream 3108 true ta_iwgsc_3al_v1_4314503: 1-3108 Triticum aestivum
Traes_3AL_4E621A250 5.0kb upstream 5.0kb upstream 1734 false ta_iwgsc_3al_v1_4314503: 1-1734 Triticum aestivum
Traes_3AL_4E621A250 5.0kb downstream 5.0kb downstream 5604 true ta_iwgsc_3al_v1_4314503: 1735-7338 Triticum aestivum
Traes_3AL_4E621A250 5.0kb downstream 5.0kb downstream 4230 false ta_iwgsc_3al_v1_4314503: 3109-7338 Triticum aestivum
Traes_3AL_4E621A250 10.0kb upstream 10.0kb upstream 3108 true ta_iwgsc_3al_v1_4314503: 1-3108 Triticum aestivum
Traes_3AL_4E621A250 10.0kb upstream 10.0kb upstream 1734 false ta_iwgsc_3al_v1_4314503: 1-1734 Triticum aestivum
Traes_3AL_4E621A250 10.0kb downstream 10.0kb downstream 5604 true ta_iwgsc_3al_v1_4314503: 1735-7338 Triticum aestivum
Traes_3AL_4E621A250 10.0kb downstream 10.0kb downstream 4230 false ta_iwgsc_3al_v1_4314503: 3109-7338 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584478 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain