Gene : Traes_4BS_40C405125 T. aestivum v2.2
Defline:  (1 of 3) KOG2496 - Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, cyclin H subunit Genomic Order:  1
Name:  ? Traes_4BS_40C405125 Secondary Identifier:  ? PAC:31808494
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_4BS_40C405125 0.5kb upstream 0.5kb upstream 4293 true ta_iwgsc_4bs_v1_755812: 460-4752 Triticum aestivum
Traes_4BS_40C405125 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_4bs_v1_755812: 4253-4752 Triticum aestivum
Traes_4BS_40C405125 0.5kb downstream 0.5kb downstream 4252 true ta_iwgsc_4bs_v1_755812: 1-4252 Triticum aestivum
Traes_4BS_40C405125 0.5kb downstream 0.5kb downstream 459 false ta_iwgsc_4bs_v1_755812: 1-459 Triticum aestivum
Traes_4BS_40C405125 1.0kb upstream 1.0kb upstream 4793 true ta_iwgsc_4bs_v1_755812: 460-5252 Triticum aestivum
Traes_4BS_40C405125 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_4bs_v1_755812: 4253-5252 Triticum aestivum
Traes_4BS_40C405125 1.0kb downstream 1.0kb downstream 4252 true ta_iwgsc_4bs_v1_755812: 1-4252 Triticum aestivum
Traes_4BS_40C405125 1.0kb downstream 1.0kb downstream 459 false ta_iwgsc_4bs_v1_755812: 1-459 Triticum aestivum
Traes_4BS_40C405125 2.0kb upstream 2.0kb upstream 4983 true ta_iwgsc_4bs_v1_755812: 460-5442 Triticum aestivum
Traes_4BS_40C405125 2.0kb upstream 2.0kb upstream 1190 false ta_iwgsc_4bs_v1_755812: 4253-5442 Triticum aestivum
Traes_4BS_40C405125 2.0kb downstream 2.0kb downstream 4252 true ta_iwgsc_4bs_v1_755812: 1-4252 Triticum aestivum
Traes_4BS_40C405125 2.0kb downstream 2.0kb downstream 459 false ta_iwgsc_4bs_v1_755812: 1-459 Triticum aestivum
Traes_4BS_40C405125 5.0kb upstream 5.0kb upstream 4983 true ta_iwgsc_4bs_v1_755812: 460-5442 Triticum aestivum
Traes_4BS_40C405125 5.0kb upstream 5.0kb upstream 1190 false ta_iwgsc_4bs_v1_755812: 4253-5442 Triticum aestivum
Traes_4BS_40C405125 5.0kb downstream 5.0kb downstream 4252 true ta_iwgsc_4bs_v1_755812: 1-4252 Triticum aestivum
Traes_4BS_40C405125 5.0kb downstream 5.0kb downstream 459 false ta_iwgsc_4bs_v1_755812: 1-459 Triticum aestivum
Traes_4BS_40C405125 10.0kb upstream 10.0kb upstream 4983 true ta_iwgsc_4bs_v1_755812: 460-5442 Triticum aestivum
Traes_4BS_40C405125 10.0kb upstream 10.0kb upstream 1190 false ta_iwgsc_4bs_v1_755812: 4253-5442 Triticum aestivum
Traes_4BS_40C405125 10.0kb downstream 10.0kb downstream 4252 true ta_iwgsc_4bs_v1_755812: 1-4252 Triticum aestivum
Traes_4BS_40C405125 10.0kb downstream 10.0kb downstream 459 false ta_iwgsc_4bs_v1_755812: 1-459 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575508 5269 Grass View MSA
122044761 5273 Angiosperm View MSA
121344916 5274 Embryophyte View MSA
123425113 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain