Gene : Traes_4DS_0A92A2224 T. aestivum v2.2
Defline:  (1 of 50) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  1
Name:  ? Traes_4DS_0A92A2224 Secondary Identifier:  ? PAC:31760151
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PHOTOALL-PWY Triticum aestivum pathologic  
Taestivum PWY-101 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_4DS_0A92A2224 0.5kb upstream 0.5kb upstream 3239 true ta_iwgsc_4ds_v1_2278903: 381-3619 Triticum aestivum
Traes_4DS_0A92A2224 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_4ds_v1_2278903: 3120-3619 Triticum aestivum
Traes_4DS_0A92A2224 0.5kb downstream 0.5kb downstream 3119 true ta_iwgsc_4ds_v1_2278903: 1-3119 Triticum aestivum
Traes_4DS_0A92A2224 0.5kb downstream 0.5kb downstream 380 false ta_iwgsc_4ds_v1_2278903: 1-380 Triticum aestivum
Traes_4DS_0A92A2224 1.0kb upstream 1.0kb upstream 3739 true ta_iwgsc_4ds_v1_2278903: 381-4119 Triticum aestivum
Traes_4DS_0A92A2224 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_4ds_v1_2278903: 3120-4119 Triticum aestivum
Traes_4DS_0A92A2224 1.0kb downstream 1.0kb downstream 3119 true ta_iwgsc_4ds_v1_2278903: 1-3119 Triticum aestivum
Traes_4DS_0A92A2224 1.0kb downstream 1.0kb downstream 380 false ta_iwgsc_4ds_v1_2278903: 1-380 Triticum aestivum
Traes_4DS_0A92A2224 2.0kb upstream 2.0kb upstream 4739 true ta_iwgsc_4ds_v1_2278903: 381-5119 Triticum aestivum
Traes_4DS_0A92A2224 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_4ds_v1_2278903: 3120-5119 Triticum aestivum
Traes_4DS_0A92A2224 2.0kb downstream 2.0kb downstream 3119 true ta_iwgsc_4ds_v1_2278903: 1-3119 Triticum aestivum
Traes_4DS_0A92A2224 2.0kb downstream 2.0kb downstream 380 false ta_iwgsc_4ds_v1_2278903: 1-380 Triticum aestivum
Traes_4DS_0A92A2224 5.0kb upstream 5.0kb upstream 7739 true ta_iwgsc_4ds_v1_2278903: 381-8119 Triticum aestivum
Traes_4DS_0A92A2224 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_4ds_v1_2278903: 3120-8119 Triticum aestivum
Traes_4DS_0A92A2224 5.0kb downstream 5.0kb downstream 3119 true ta_iwgsc_4ds_v1_2278903: 1-3119 Triticum aestivum
Traes_4DS_0A92A2224 5.0kb downstream 5.0kb downstream 380 false ta_iwgsc_4ds_v1_2278903: 1-380 Triticum aestivum
Traes_4DS_0A92A2224 10.0kb upstream 10.0kb upstream 10234 true ta_iwgsc_4ds_v1_2278903: 381-10614 Triticum aestivum
Traes_4DS_0A92A2224 10.0kb upstream 10.0kb upstream 7495 false ta_iwgsc_4ds_v1_2278903: 3120-10614 Triticum aestivum
Traes_4DS_0A92A2224 10.0kb downstream 10.0kb downstream 3119 true ta_iwgsc_4ds_v1_2278903: 1-3119 Triticum aestivum
Traes_4DS_0A92A2224 10.0kb downstream 10.0kb downstream 380 false ta_iwgsc_4ds_v1_2278903: 1-380 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591124 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain