Gene : Traes_5AL_4E621A250 T. aestivum v2.2
Defline:  (1 of 115) PF00421 - Photosystem II protein (PSII) Genomic Order:  2
Name:  ? Traes_5AL_4E621A250 Secondary Identifier:  ? PAC:31840502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5AL_4E621A250 0.5kb upstream 0.5kb upstream 1874 true ta_iwgsc_5al_v1_2741308: 5210-7083 Triticum aestivum
Traes_5AL_4E621A250 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5al_v1_2741308: 6584-7083 Triticum aestivum
Traes_5AL_4E621A250 0.5kb downstream 0.5kb downstream 1874 true ta_iwgsc_5al_v1_2741308: 4710-6583 Triticum aestivum
Traes_5AL_4E621A250 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5al_v1_2741308: 4710-5209 Triticum aestivum
Traes_5AL_4E621A250 1.0kb upstream 1.0kb upstream 2374 true ta_iwgsc_5al_v1_2741308: 5210-7583 Triticum aestivum
Traes_5AL_4E621A250 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5al_v1_2741308: 6584-7583 Triticum aestivum
Traes_5AL_4E621A250 1.0kb downstream 1.0kb downstream 2374 true ta_iwgsc_5al_v1_2741308: 4210-6583 Triticum aestivum
Traes_5AL_4E621A250 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5al_v1_2741308: 4210-5209 Triticum aestivum
Traes_5AL_4E621A250 2.0kb upstream 2.0kb upstream 3374 true ta_iwgsc_5al_v1_2741308: 5210-8583 Triticum aestivum
Traes_5AL_4E621A250 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5al_v1_2741308: 6584-8583 Triticum aestivum
Traes_5AL_4E621A250 2.0kb downstream 2.0kb downstream 3374 true ta_iwgsc_5al_v1_2741308: 3210-6583 Triticum aestivum
Traes_5AL_4E621A250 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5al_v1_2741308: 3210-5209 Triticum aestivum
Traes_5AL_4E621A250 5.0kb upstream 5.0kb upstream 6374 true ta_iwgsc_5al_v1_2741308: 5210-11583 Triticum aestivum
Traes_5AL_4E621A250 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5al_v1_2741308: 6584-11583 Triticum aestivum
Traes_5AL_4E621A250 5.0kb downstream 5.0kb downstream 6374 true ta_iwgsc_5al_v1_2741308: 210-6583 Triticum aestivum
Traes_5AL_4E621A250 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5al_v1_2741308: 210-5209 Triticum aestivum
Traes_5AL_4E621A250 10.0kb upstream 10.0kb upstream 7811 true ta_iwgsc_5al_v1_2741308: 5210-13020 Triticum aestivum
Traes_5AL_4E621A250 10.0kb upstream 10.0kb upstream 6437 false ta_iwgsc_5al_v1_2741308: 6584-13020 Triticum aestivum
Traes_5AL_4E621A250 10.0kb downstream 10.0kb downstream 6583 true ta_iwgsc_5al_v1_2741308: 1-6583 Triticum aestivum
Traes_5AL_4E621A250 10.0kb downstream 10.0kb downstream 5209 false ta_iwgsc_5al_v1_2741308: 1-5209 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584478 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain