Gene : Traes_5AS_0A92A2224 T. aestivum v2.2
Defline:  (1 of 50) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  4
Name:  ? Traes_5AS_0A92A2224 Secondary Identifier:  ? PAC:31793290
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PHOTOALL-PWY Triticum aestivum pathologic  
Taestivum PWY-101 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_5AS_0A92A2224 0.5kb upstream 0.5kb upstream 2851 true ta_iwgsc_5as_v1_1504017: 21624-24474 Triticum aestivum
Traes_5AS_0A92A2224 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_5as_v1_1504017: 23975-24474 Triticum aestivum
Traes_5AS_0A92A2224 0.5kb downstream 0.5kb downstream 2851 true ta_iwgsc_5as_v1_1504017: 21124-23974 Triticum aestivum
Traes_5AS_0A92A2224 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_5as_v1_1504017: 21124-21623 Triticum aestivum
Traes_5AS_0A92A2224 1.0kb upstream 1.0kb upstream 3351 true ta_iwgsc_5as_v1_1504017: 21624-24974 Triticum aestivum
Traes_5AS_0A92A2224 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_5as_v1_1504017: 23975-24974 Triticum aestivum
Traes_5AS_0A92A2224 1.0kb downstream 1.0kb downstream 3351 true ta_iwgsc_5as_v1_1504017: 20624-23974 Triticum aestivum
Traes_5AS_0A92A2224 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_5as_v1_1504017: 20624-21623 Triticum aestivum
Traes_5AS_0A92A2224 2.0kb upstream 2.0kb upstream 4351 true ta_iwgsc_5as_v1_1504017: 21624-25974 Triticum aestivum
Traes_5AS_0A92A2224 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_5as_v1_1504017: 23975-25974 Triticum aestivum
Traes_5AS_0A92A2224 2.0kb downstream 2.0kb downstream 4351 true ta_iwgsc_5as_v1_1504017: 19624-23974 Triticum aestivum
Traes_5AS_0A92A2224 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_5as_v1_1504017: 19624-21623 Triticum aestivum
Traes_5AS_0A92A2224 5.0kb upstream 5.0kb upstream 7351 true ta_iwgsc_5as_v1_1504017: 21624-28974 Triticum aestivum
Traes_5AS_0A92A2224 5.0kb upstream 5.0kb upstream 5000 false ta_iwgsc_5as_v1_1504017: 23975-28974 Triticum aestivum
Traes_5AS_0A92A2224 5.0kb downstream 5.0kb downstream 7351 true ta_iwgsc_5as_v1_1504017: 16624-23974 Triticum aestivum
Traes_5AS_0A92A2224 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_5as_v1_1504017: 16624-21623 Triticum aestivum
Traes_5AS_0A92A2224 10.0kb upstream 10.0kb upstream 12351 true ta_iwgsc_5as_v1_1504017: 21624-33974 Triticum aestivum
Traes_5AS_0A92A2224 10.0kb upstream 10.0kb upstream 10000 false ta_iwgsc_5as_v1_1504017: 23975-33974 Triticum aestivum
Traes_5AS_0A92A2224 10.0kb downstream 10.0kb downstream 12351 true ta_iwgsc_5as_v1_1504017: 11624-23974 Triticum aestivum
Traes_5AS_0A92A2224 10.0kb downstream 10.0kb downstream 10000 false ta_iwgsc_5as_v1_1504017: 11624-21623 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124591124 5269 Grass View MSA
122051576 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350250 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain