Gene : Traes_6AL_27DFA0577 T. aestivum v2.2
Defline:  (1 of 3) PF17125 - N-terminal domain of 16S rRNA methyltransferase RsmF (Methyltr_RsmF_N) Genomic Order:  2
Name:  ? Traes_6AL_27DFA0577 Secondary Identifier:  ? PAC:31884707
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Taestivum PWY-6829 Triticum aestivum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Traes_6AL_27DFA0577 0.5kb upstream 0.5kb upstream 6170 true ta_iwgsc_6al_v1_5754537: 2565-8734 Triticum aestivum
Traes_6AL_27DFA0577 0.5kb upstream 0.5kb upstream 500 false ta_iwgsc_6al_v1_5754537: 2565-3064 Triticum aestivum
Traes_6AL_27DFA0577 0.5kb downstream 0.5kb downstream 6170 true ta_iwgsc_6al_v1_5754537: 3065-9234 Triticum aestivum
Traes_6AL_27DFA0577 0.5kb downstream 0.5kb downstream 500 false ta_iwgsc_6al_v1_5754537: 8735-9234 Triticum aestivum
Traes_6AL_27DFA0577 1.0kb upstream 1.0kb upstream 6670 true ta_iwgsc_6al_v1_5754537: 2065-8734 Triticum aestivum
Traes_6AL_27DFA0577 1.0kb upstream 1.0kb upstream 1000 false ta_iwgsc_6al_v1_5754537: 2065-3064 Triticum aestivum
Traes_6AL_27DFA0577 1.0kb downstream 1.0kb downstream 6670 true ta_iwgsc_6al_v1_5754537: 3065-9734 Triticum aestivum
Traes_6AL_27DFA0577 1.0kb downstream 1.0kb downstream 1000 false ta_iwgsc_6al_v1_5754537: 8735-9734 Triticum aestivum
Traes_6AL_27DFA0577 2.0kb upstream 2.0kb upstream 7670 true ta_iwgsc_6al_v1_5754537: 1065-8734 Triticum aestivum
Traes_6AL_27DFA0577 2.0kb upstream 2.0kb upstream 2000 false ta_iwgsc_6al_v1_5754537: 1065-3064 Triticum aestivum
Traes_6AL_27DFA0577 2.0kb downstream 2.0kb downstream 7670 true ta_iwgsc_6al_v1_5754537: 3065-10734 Triticum aestivum
Traes_6AL_27DFA0577 2.0kb downstream 2.0kb downstream 2000 false ta_iwgsc_6al_v1_5754537: 8735-10734 Triticum aestivum
Traes_6AL_27DFA0577 5.0kb upstream 5.0kb upstream 8734 true ta_iwgsc_6al_v1_5754537: 1-8734 Triticum aestivum
Traes_6AL_27DFA0577 5.0kb upstream 5.0kb upstream 3064 false ta_iwgsc_6al_v1_5754537: 1-3064 Triticum aestivum
Traes_6AL_27DFA0577 5.0kb downstream 5.0kb downstream 10670 true ta_iwgsc_6al_v1_5754537: 3065-13734 Triticum aestivum
Traes_6AL_27DFA0577 5.0kb downstream 5.0kb downstream 5000 false ta_iwgsc_6al_v1_5754537: 8735-13734 Triticum aestivum
Traes_6AL_27DFA0577 10.0kb upstream 10.0kb upstream 8734 true ta_iwgsc_6al_v1_5754537: 1-8734 Triticum aestivum
Traes_6AL_27DFA0577 10.0kb upstream 10.0kb upstream 3064 false ta_iwgsc_6al_v1_5754537: 1-3064 Triticum aestivum
Traes_6AL_27DFA0577 10.0kb downstream 10.0kb downstream 13522 true ta_iwgsc_6al_v1_5754537: 3065-16586 Triticum aestivum
Traes_6AL_27DFA0577 10.0kb downstream 10.0kb downstream 7852 false ta_iwgsc_6al_v1_5754537: 8735-16586 Triticum aestivum

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583687 5269 Grass View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain