Protein : Carub.0005s1088.1.p C. rubella v1.1
Secondary Identifier:  PAC:39225450 Organism Name:  Capsella rubella
Length:  489   Name:  Carub.0005s1088.1.p
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SummaryProteinsOther
 
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SummaryProteinsOther
 

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Proteins

8 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR006195 Domain Aminoacyl-tRNA synthetase, class II
IPR006195 Domain Aminoacyl-tRNA synthetase, class II
IPR004529 Family Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
IPR004529 Family Phenylalanyl-tRNA synthetase, class IIc, alpha subunit
IPR002319 Domain Phenylalanyl-tRNA synthetase
IPR002319 Domain Phenylalanyl-tRNA synthetase
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0005s1088.1_CDS 1470   scaffold_5: 6499919-6502969 Capsella rubella

25 Ontology Annotations

Ontology Term Db Gene/Protein Name
G3DSA:1.10.10.10 GENE3D Carub.0005s1088.1.p
6.1.1.20 ENZYME Carub.0005s1088.1.p
GO:0000049 GO Carub.0005s1088.1.p
G3DSA:3.30.930.10 GENE3D Carub.0005s1088.1.p
GO:0004812 GO Carub.0005s1088.1.p
GO:0000166 GO Carub.0005s1088.1.p
GO:0005524 GO Carub.0005s1088.1.p
GO:0004826 GO Carub.0005s1088.1.p
PHENYLALANINE--TRNA-LIGASE-RXN MetaCyc Carub.0005s1088.1.p
K01889 KEGG Carub.0005s1088.1.p
PTHR11538:SF40 PANTHER Carub.0005s1088.1.p
PTHR11538 PANTHER Carub.0005s1088.1.p
PF01409 PFAM Carub.0005s1088.1.p
TRNA-CHARGING-PWY Pathway Carub.0005s1088.1.p
SSF55681 SSF Carub.0005s1088.1.p
PS50862 PROFILE Carub.0005s1088.1.p
GO:0006418 GO Carub.0005s1088.1.p
GO:0005737 GO Carub.0005s1088.1.p
GO:0043039 GO Carub.0005s1088.1.p
GO:0006432 GO Carub.0005s1088.1.p
IPR004529 InterPro Carub.0005s1088.1.p
IPR002319 InterPro Carub.0005s1088.1.p
IPR011991 InterPro Carub.0005s1088.1.p
IPR006195 InterPro Carub.0005s1088.1.p
TIGR00468 TIGRFAMs Carub.0005s1088.1.p

1 Pathway Components

Type Key Level Step
      97

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella TRNA-CHARGING-PWY Capsella rubella pathologic