Gene : 11289 S. moellendorffii v1.0
Defline:  (1 of 14) 1.13.11.51 - 9-cis-epoxycarotenoid dioxygenase / VP14 Genomic Order:  342
Name:  ? 11289 Secondary Identifier:  ? PAC:15423332
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Smoellendorffii PWY-695 Selaginella moellendorffii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
11289 0.5kb upstream 0.5kb upstream 2075 true scaffold_12: 2781261-2783335 Selaginella moellendorffii
11289 0.5kb upstream 0.5kb upstream 500 false scaffold_12: 2781261-2781760 Selaginella moellendorffii
11289 0.5kb downstream 0.5kb downstream 2075 true scaffold_12: 2781761-2783835 Selaginella moellendorffii
11289 0.5kb downstream 0.5kb downstream 500 false scaffold_12: 2783336-2783835 Selaginella moellendorffii
11289 1.0kb upstream 1.0kb upstream 2575 true scaffold_12: 2780761-2783335 Selaginella moellendorffii
11289 1.0kb upstream 1.0kb upstream 1000 false scaffold_12: 2780761-2781760 Selaginella moellendorffii
11289 1.0kb downstream 1.0kb downstream 2575 true scaffold_12: 2781761-2784335 Selaginella moellendorffii
11289 1.0kb downstream 1.0kb downstream 1000 false scaffold_12: 2783336-2784335 Selaginella moellendorffii
11289 2.0kb upstream 2.0kb upstream 3575 true scaffold_12: 2779761-2783335 Selaginella moellendorffii
11289 2.0kb upstream 2.0kb upstream 2000 false scaffold_12: 2779761-2781760 Selaginella moellendorffii
11289 2.0kb downstream 2.0kb downstream 3575 true scaffold_12: 2781761-2785335 Selaginella moellendorffii
11289 2.0kb downstream 2.0kb downstream 2000 false scaffold_12: 2783336-2785335 Selaginella moellendorffii
11289 5.0kb upstream 5.0kb upstream 6575 true scaffold_12: 2776761-2783335 Selaginella moellendorffii
11289 5.0kb upstream 5.0kb upstream 5000 false scaffold_12: 2776761-2781760 Selaginella moellendorffii
11289 5.0kb downstream 5.0kb downstream 6575 true scaffold_12: 2781761-2788335 Selaginella moellendorffii
11289 5.0kb downstream 5.0kb downstream 5000 false scaffold_12: 2783336-2788335 Selaginella moellendorffii
11289 10.0kb upstream 10.0kb upstream 11575 true scaffold_12: 2771761-2783335 Selaginella moellendorffii
11289 10.0kb upstream 10.0kb upstream 10000 false scaffold_12: 2771761-2781760 Selaginella moellendorffii
11289 10.0kb downstream 10.0kb downstream 11575 true scaffold_12: 2781761-2793335 Selaginella moellendorffii
11289 10.0kb downstream 10.0kb downstream 10000 false scaffold_12: 2783336-2793335 Selaginella moellendorffii

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121323363 5274 Embryophyte View MSA
123360434 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain