Gene : orange1.1g006969m.g C. sinensis v1.1
Defline:  (1 of 1) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase Genomic Order:  1
Name:  ? orange1.1g006969m.g Secondary Identifier:  ? PAC:18137795
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis BRANCHED-CHAIN-AA-SYN-PWY Citrus sinensis pathologic  
Csinensis LEUSYN-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g006969m.g 0.5kb upstream 0.5kb upstream 8145 true scaffold00788: 4686-12830 Citrus sinensis
orange1.1g006969m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00788: 4686-5185 Citrus sinensis
orange1.1g006969m.g 0.5kb downstream 0.5kb downstream 8145 true scaffold00788: 5186-13330 Citrus sinensis
orange1.1g006969m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00788: 12831-13330 Citrus sinensis
orange1.1g006969m.g 1.0kb upstream 1.0kb upstream 8645 true scaffold00788: 4186-12830 Citrus sinensis
orange1.1g006969m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00788: 4186-5185 Citrus sinensis
orange1.1g006969m.g 1.0kb downstream 1.0kb downstream 8645 true scaffold00788: 5186-13830 Citrus sinensis
orange1.1g006969m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00788: 12831-13830 Citrus sinensis
orange1.1g006969m.g 2.0kb upstream 2.0kb upstream 9645 true scaffold00788: 3186-12830 Citrus sinensis
orange1.1g006969m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00788: 3186-5185 Citrus sinensis
orange1.1g006969m.g 2.0kb downstream 2.0kb downstream 9645 true scaffold00788: 5186-14830 Citrus sinensis
orange1.1g006969m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00788: 12831-14830 Citrus sinensis
orange1.1g006969m.g 5.0kb upstream 5.0kb upstream 12645 true scaffold00788: 186-12830 Citrus sinensis
orange1.1g006969m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00788: 186-5185 Citrus sinensis
orange1.1g006969m.g 5.0kb downstream 5.0kb downstream 12645 true scaffold00788: 5186-17830 Citrus sinensis
orange1.1g006969m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00788: 12831-17830 Citrus sinensis
orange1.1g006969m.g 10.0kb upstream 10.0kb upstream 12830 true scaffold00788: 1-12830 Citrus sinensis
orange1.1g006969m.g 10.0kb upstream 10.0kb upstream 5185 false scaffold00788: 1-5185 Citrus sinensis
orange1.1g006969m.g 10.0kb downstream 10.0kb downstream 17645 true scaffold00788: 5186-22830 Citrus sinensis
orange1.1g006969m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00788: 12831-22830 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124322248 5266 SBM View MSA
124251393 5268 Malvidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain