Gene : orange1.1g003601m.g C. sinensis v1.1
Defline:  (1 of 4) 6.1.1.10 - Methionine--tRNA ligase / MetRS Genomic Order:  1
Name:  ? orange1.1g003601m.g Secondary Identifier:  ? PAC:18124306
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003601m.g 0.5kb upstream 0.5kb upstream 7473 true scaffold00811: 7419-14891 Citrus sinensis
orange1.1g003601m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00811: 7419-7918 Citrus sinensis
orange1.1g003601m.g 0.5kb downstream 0.5kb downstream 7473 true scaffold00811: 7919-15391 Citrus sinensis
orange1.1g003601m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00811: 14892-15391 Citrus sinensis
orange1.1g003601m.g 1.0kb upstream 1.0kb upstream 7973 true scaffold00811: 6919-14891 Citrus sinensis
orange1.1g003601m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00811: 6919-7918 Citrus sinensis
orange1.1g003601m.g 1.0kb downstream 1.0kb downstream 7973 true scaffold00811: 7919-15891 Citrus sinensis
orange1.1g003601m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00811: 14892-15891 Citrus sinensis
orange1.1g003601m.g 2.0kb upstream 2.0kb upstream 8973 true scaffold00811: 5919-14891 Citrus sinensis
orange1.1g003601m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00811: 5919-7918 Citrus sinensis
orange1.1g003601m.g 2.0kb downstream 2.0kb downstream 8973 true scaffold00811: 7919-16891 Citrus sinensis
orange1.1g003601m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00811: 14892-16891 Citrus sinensis
orange1.1g003601m.g 5.0kb upstream 5.0kb upstream 11973 true scaffold00811: 2919-14891 Citrus sinensis
orange1.1g003601m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00811: 2919-7918 Citrus sinensis
orange1.1g003601m.g 5.0kb downstream 5.0kb downstream 11973 true scaffold00811: 7919-19891 Citrus sinensis
orange1.1g003601m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00811: 14892-19891 Citrus sinensis
orange1.1g003601m.g 10.0kb upstream 10.0kb upstream 14891 true scaffold00811: 1-14891 Citrus sinensis
orange1.1g003601m.g 10.0kb upstream 10.0kb upstream 7918 false scaffold00811: 1-7918 Citrus sinensis
orange1.1g003601m.g 10.0kb downstream 10.0kb downstream 16973 true scaffold00811: 7919-24891 Citrus sinensis
orange1.1g003601m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00811: 14892-24891 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124338406 5266 SBM View MSA
124247313 5268 Malvidae View MSA
124066402 5270 Rosid View MSA
123739463 5271 Pentapetalae View MSA
122793532 5272 Eudicot View MSA
122041539 5273 Angiosperm View MSA
121348816 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain