Gene : orange1.1g042128m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR11615:SF116 - CASPARIAN STRIP MEMBRANE PROTEIN 1-RELATED Genomic Order:  3
Name:  ? orange1.1g042128m.g Secondary Identifier:  ? PAC:18095180
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g042128m.g 0.5kb upstream 0.5kb upstream 1341 true scaffold01471: 15730-17070 Citrus sinensis
orange1.1g042128m.g 0.5kb upstream 0.5kb upstream 500 false scaffold01471: 16571-17070 Citrus sinensis
orange1.1g042128m.g 0.5kb downstream 0.5kb downstream 1341 true scaffold01471: 15230-16570 Citrus sinensis
orange1.1g042128m.g 0.5kb downstream 0.5kb downstream 500 false scaffold01471: 15230-15729 Citrus sinensis
orange1.1g042128m.g 1.0kb upstream 1.0kb upstream 1841 true scaffold01471: 15730-17570 Citrus sinensis
orange1.1g042128m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold01471: 16571-17570 Citrus sinensis
orange1.1g042128m.g 1.0kb downstream 1.0kb downstream 1841 true scaffold01471: 14730-16570 Citrus sinensis
orange1.1g042128m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold01471: 14730-15729 Citrus sinensis
orange1.1g042128m.g 2.0kb upstream 2.0kb upstream 2841 true scaffold01471: 15730-18570 Citrus sinensis
orange1.1g042128m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold01471: 16571-18570 Citrus sinensis
orange1.1g042128m.g 2.0kb downstream 2.0kb downstream 2841 true scaffold01471: 13730-16570 Citrus sinensis
orange1.1g042128m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold01471: 13730-15729 Citrus sinensis
orange1.1g042128m.g 5.0kb upstream 5.0kb upstream 5841 true scaffold01471: 15730-21570 Citrus sinensis
orange1.1g042128m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold01471: 16571-21570 Citrus sinensis
orange1.1g042128m.g 5.0kb downstream 5.0kb downstream 5841 true scaffold01471: 10730-16570 Citrus sinensis
orange1.1g042128m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold01471: 10730-15729 Citrus sinensis
orange1.1g042128m.g 10.0kb upstream 10.0kb upstream 8500 true scaffold01471: 15730-24229 Citrus sinensis
orange1.1g042128m.g 10.0kb upstream 10.0kb upstream 7659 false scaffold01471: 16571-24229 Citrus sinensis
orange1.1g042128m.g 10.0kb downstream 10.0kb downstream 10841 true scaffold01471: 5730-16570 Citrus sinensis
orange1.1g042128m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold01471: 5730-15729 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343898 5266 SBM View MSA
124240358 5268 Malvidae View MSA
124067511 5270 Rosid View MSA
123750360 5271 Pentapetalae View MSA
122793226 5272 Eudicot View MSA
122046070 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain