Gene : orange1.1g033996m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR10966 - TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 Genomic Order:  325
Name:  ? orange1.1g033996m.g Secondary Identifier:  ? PAC:18107674
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g033996m.g 0.5kb upstream 0.5kb upstream 3059 true scaffold00004: 2551110-2554168 Citrus sinensis
orange1.1g033996m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00004: 2553669-2554168 Citrus sinensis
orange1.1g033996m.g 0.5kb downstream 0.5kb downstream 3059 true scaffold00004: 2550610-2553668 Citrus sinensis
orange1.1g033996m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00004: 2550610-2551109 Citrus sinensis
orange1.1g033996m.g 1.0kb upstream 1.0kb upstream 3559 true scaffold00004: 2551110-2554668 Citrus sinensis
orange1.1g033996m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00004: 2553669-2554668 Citrus sinensis
orange1.1g033996m.g 1.0kb downstream 1.0kb downstream 3559 true scaffold00004: 2550110-2553668 Citrus sinensis
orange1.1g033996m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00004: 2550110-2551109 Citrus sinensis
orange1.1g033996m.g 2.0kb upstream 2.0kb upstream 4559 true scaffold00004: 2551110-2555668 Citrus sinensis
orange1.1g033996m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00004: 2553669-2555668 Citrus sinensis
orange1.1g033996m.g 2.0kb downstream 2.0kb downstream 4559 true scaffold00004: 2549110-2553668 Citrus sinensis
orange1.1g033996m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00004: 2549110-2551109 Citrus sinensis
orange1.1g033996m.g 5.0kb upstream 5.0kb upstream 7559 true scaffold00004: 2551110-2558668 Citrus sinensis
orange1.1g033996m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00004: 2553669-2558668 Citrus sinensis
orange1.1g033996m.g 5.0kb downstream 5.0kb downstream 7559 true scaffold00004: 2546110-2553668 Citrus sinensis
orange1.1g033996m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00004: 2546110-2551109 Citrus sinensis
orange1.1g033996m.g 10.0kb upstream 10.0kb upstream 12559 true scaffold00004: 2551110-2563668 Citrus sinensis
orange1.1g033996m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00004: 2553669-2563668 Citrus sinensis
orange1.1g033996m.g 10.0kb downstream 10.0kb downstream 12559 true scaffold00004: 2541110-2553668 Citrus sinensis
orange1.1g033996m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00004: 2541110-2551109 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342942 5266 SBM View MSA
124244097 5268 Malvidae View MSA
124060415 5270 Rosid View MSA
123747373 5271 Pentapetalae View MSA
122787968 5272 Eudicot View MSA
122045425 5273 Angiosperm View MSA
121349813 5274 Embryophyte View MSA
123423825 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain