Gene : orange1.1g027504m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED Genomic Order:  307
Name:  ? orange1.1g027504m.g Secondary Identifier:  ? PAC:18124990
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g027504m.g 0.5kb upstream 0.5kb upstream 1855 true scaffold00006: 2394852-2396706 Citrus sinensis
orange1.1g027504m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 2396207-2396706 Citrus sinensis
orange1.1g027504m.g 0.5kb downstream 0.5kb downstream 1855 true scaffold00006: 2394352-2396206 Citrus sinensis
orange1.1g027504m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 2394352-2394851 Citrus sinensis
orange1.1g027504m.g 1.0kb upstream 1.0kb upstream 2355 true scaffold00006: 2394852-2397206 Citrus sinensis
orange1.1g027504m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 2396207-2397206 Citrus sinensis
orange1.1g027504m.g 1.0kb downstream 1.0kb downstream 2355 true scaffold00006: 2393852-2396206 Citrus sinensis
orange1.1g027504m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 2393852-2394851 Citrus sinensis
orange1.1g027504m.g 2.0kb upstream 2.0kb upstream 3355 true scaffold00006: 2394852-2398206 Citrus sinensis
orange1.1g027504m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 2396207-2398206 Citrus sinensis
orange1.1g027504m.g 2.0kb downstream 2.0kb downstream 3355 true scaffold00006: 2392852-2396206 Citrus sinensis
orange1.1g027504m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 2392852-2394851 Citrus sinensis
orange1.1g027504m.g 5.0kb upstream 5.0kb upstream 6355 true scaffold00006: 2394852-2401206 Citrus sinensis
orange1.1g027504m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 2396207-2401206 Citrus sinensis
orange1.1g027504m.g 5.0kb downstream 5.0kb downstream 6355 true scaffold00006: 2389852-2396206 Citrus sinensis
orange1.1g027504m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 2389852-2394851 Citrus sinensis
orange1.1g027504m.g 10.0kb upstream 10.0kb upstream 11355 true scaffold00006: 2394852-2406206 Citrus sinensis
orange1.1g027504m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 2396207-2406206 Citrus sinensis
orange1.1g027504m.g 10.0kb downstream 10.0kb downstream 11355 true scaffold00006: 2384852-2396206 Citrus sinensis
orange1.1g027504m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 2384852-2394851 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124340698 5266 SBM View MSA
124252660 5268 Malvidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain