Protein Family : RING/U-box superfamily protein 124252660

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  42

42 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30170.t000400 (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED R. communis v0.1 1514   30170: 2166621-2168134
29250.t000003 (1 of 1) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED R. communis v0.1 1369   29250: 16825-18193
orange1.1g027504m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. sinensis v1.1 1355   scaffold00006: 2394852-2396206
orange1.1g027010m.g (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 C. sinensis v1.1 1559   scaffold00002: 2680605-2682163
AT1G19310 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED A. thaliana TAIR10 1440   Chr1: 6676234-6677673
AT2G23780 (1 of 1) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED A. thaliana TAIR10 1331   Chr2: 10123306-10124636
Thhalv10000313m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED E. salsugineum v1.0 1328   scaffold_15: 2256201-2257528
Thhalv10008430m.g (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 E. salsugineum v1.0 1551   scaffold_5: 8855253-8856803
Ciclev10002367m.g (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 C. clementina v1.0 1641   scaffold_5: 40735856-40737496
Ciclev10026329m.g (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. clementina v1.0 3758   scaffold_7: 2432146-2435903
Lus10010791.g (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 L. usitatissimum v1.0 687   scaffold239: 48314-49000
Lus10022492.g (1 of 2) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED L. usitatissimum v1.0 690   scaffold38: 811862-812551
Lus10016303.g (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 L. usitatissimum v1.0 687   scaffold515: 325045-325731
Lus10016796.g (1 of 2) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED L. usitatissimum v1.0 690   scaffold903: 545138-545827
Gorai.002G129700 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 G. raimondii v2.1 1511   Chr02: 20189900-20191410
Gorai.008G069900 (1 of 2) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED G. raimondii v2.1 1784   Chr08: 11728567-11730350
Gorai.010G012500 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 G. raimondii v2.1 1678   Chr10: 964815-966492
Thecc1EG000464 (1 of 1) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED T. cacao v1.1 1733   scaffold_1: 1911368-1913100
Thecc1EG033981 (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED T. cacao v1.1 3771   scaffold_8: 947970-951740
Araha.4196s0001 (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED A. halleri v1.1 1286   Scaffold4196: 5180-6465
Araha.6310s0010 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 A. halleri v1.1 1268   Scaffold6310: 65801-67068
Cagra.1961s0070 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 C. grandiflora v1.1 1340   Scaffold1961: 267579-268918
Cagra.5224s0006 (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED C. grandiflora v1.1 1305   Scaffold5224: 25853-27157
Brara.F01363 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 B. rapa FPsc v1.3 1652   A06: 7713530-7715181
Brara.D01417 (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED B. rapa FPsc v1.3 1258   A04: 12919404-12920661
Bostr.27895s0116 (1 of 1) PTHR12313:SF12 - RING ZINC FINGER PROTEIN-RELATED B. stricta v1.2 1366   Scaffold27895: 1073230-1074595
Bostr.7128s0535 (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 B. stricta v1.2 1371   Scaffold7128: 2447672-2449042
SapurV1A.0715s0070 (1 of 3) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED S. purpurea v1.0 1690   chr14: 2188031-2189720
SapurV1A.1327s0090 (1 of 2) PTHR12313//PTHR12313:SF12 - RNF5 // RING ZINC FINGER PROTEIN-RELATED S. purpurea v1.0 1489   chr05: 8823852-8825340
SapurV1A.0017s0660 (1 of 1) KOG0823//KOG4172 - Predicted E3 ubiquitin ligase // Predicted E3 ubiquitin ligase S. purpurea v1.0 8672   chr02: 10790200-10798871

42 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29250.m000232 R. communis v0.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
AT2G23780.1 A. thaliana TAIR10 124252660 RING/U-box superfamily protein 2 5268 Malvidae
AT1G19310.1 A. thaliana TAIR10 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Lus10016303 L. usitatissimum v1.0 124252660 RING/U-box superfamily protein 4 5268 Malvidae
Lus10010791 L. usitatissimum v1.0 124252660 RING/U-box superfamily protein 4 5268 Malvidae
Cagra.1961s0070.1.p C. grandiflora v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Brara.D01417.1.p B. rapa FPsc v1.3 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Bostr.7128s0535.1.p B. stricta v1.2 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Potri.014G040400.2.p P. trichocarpa v3.1 124252660 RING/U-box superfamily protein 3 5268 Malvidae
Podel.05G141400.1.p P. deltoides WV94 v2.1 124252660 RING/U-box superfamily protein 3 5268 Malvidae
Carub.0004s0296.1.p C. rubella v1.1 124252660 RING/U-box superfamily protein 1 5268 Malvidae
30170.m013988 R. communis v0.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
orange1.1g027504m C. sinensis v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
orange1.1g027010m C. sinensis v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10000313m E. salsugineum v1.0 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Thhalv10008430m E. salsugineum v1.0 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10026329m C. clementina v1.0 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Ciclev10002367m C. clementina v1.0 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Lus10016796 L. usitatissimum v1.0 124252660 RING/U-box superfamily protein 4 5268 Malvidae
Lus10022492 L. usitatissimum v1.0 124252660 RING/U-box superfamily protein 4 5268 Malvidae
Gorai.010G012500.1 G. raimondii v2.1 124252660 RING/U-box superfamily protein 3 5268 Malvidae
Gorai.008G069900.1 G. raimondii v2.1 124252660 RING/U-box superfamily protein 3 5268 Malvidae
Gorai.002G129700.1 G. raimondii v2.1 124252660 RING/U-box superfamily protein 3 5268 Malvidae
Thecc1EG000464t1 T. cacao v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Thecc1EG033981t1 T. cacao v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Araha.4196s0001.1.p A. halleri v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Araha.6310s0010.1.p A. halleri v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Cagra.5224s0006.1.p C. grandiflora v1.1 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Brara.F01363.1.p B. rapa FPsc v1.3 124252660 RING/U-box superfamily protein 2 5268 Malvidae
Bostr.27895s0116.1.p B. stricta v1.2 124252660 RING/U-box superfamily protein 2 5268 Malvidae