Gene : Thecc1EG033981 T. cacao v1.1
Defline:  (1 of 1) PTHR12313//PTHR12313:SF10 - RNF5 // SUBFAMILY NOT NAMED Genomic Order:  206
Name:  ? Thecc1EG033981 Secondary Identifier:  ? PAC:27458638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG033981 0.5kb upstream 0.5kb upstream 4271 true scaffold_8: 947970-952240 Theobroma cacao
Thecc1EG033981 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 951741-952240 Theobroma cacao
Thecc1EG033981 0.5kb downstream 0.5kb downstream 4271 true scaffold_8: 947470-951740 Theobroma cacao
Thecc1EG033981 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 947470-947969 Theobroma cacao
Thecc1EG033981 1.0kb upstream 1.0kb upstream 4771 true scaffold_8: 947970-952740 Theobroma cacao
Thecc1EG033981 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 951741-952740 Theobroma cacao
Thecc1EG033981 1.0kb downstream 1.0kb downstream 4771 true scaffold_8: 946970-951740 Theobroma cacao
Thecc1EG033981 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 946970-947969 Theobroma cacao
Thecc1EG033981 2.0kb upstream 2.0kb upstream 5771 true scaffold_8: 947970-953740 Theobroma cacao
Thecc1EG033981 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 951741-953740 Theobroma cacao
Thecc1EG033981 2.0kb downstream 2.0kb downstream 5771 true scaffold_8: 945970-951740 Theobroma cacao
Thecc1EG033981 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 945970-947969 Theobroma cacao
Thecc1EG033981 5.0kb upstream 5.0kb upstream 8771 true scaffold_8: 947970-956740 Theobroma cacao
Thecc1EG033981 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 951741-956740 Theobroma cacao
Thecc1EG033981 5.0kb downstream 5.0kb downstream 8771 true scaffold_8: 942970-951740 Theobroma cacao
Thecc1EG033981 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 942970-947969 Theobroma cacao
Thecc1EG033981 10.0kb upstream 10.0kb upstream 13771 true scaffold_8: 947970-961740 Theobroma cacao
Thecc1EG033981 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 951741-961740 Theobroma cacao
Thecc1EG033981 10.0kb downstream 10.0kb downstream 13771 true scaffold_8: 937970-951740 Theobroma cacao
Thecc1EG033981 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 937970-947969 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839828 5264 Brassicales-Malvales View MSA
124341264 5266 SBM View MSA
124252660 5268 Malvidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain