Gene : Cagra.1961s0070 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12313//PTHR12313:SF10 - RNF5 Genomic Order:  70
Name:  ? Cagra.1961s0070 Secondary Identifier:  ? PAC:28911489
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1961s0070 0.5kb upstream 0.5kb upstream 1840 true Scaffold1961: 267079-268918 Capsella grandiflora
Cagra.1961s0070 0.5kb upstream 0.5kb upstream 500 false Scaffold1961: 267079-267578 Capsella grandiflora
Cagra.1961s0070 0.5kb downstream 0.5kb downstream 1840 true Scaffold1961: 267579-269418 Capsella grandiflora
Cagra.1961s0070 0.5kb downstream 0.5kb downstream 500 false Scaffold1961: 268919-269418 Capsella grandiflora
Cagra.1961s0070 1.0kb upstream 1.0kb upstream 2340 true Scaffold1961: 266579-268918 Capsella grandiflora
Cagra.1961s0070 1.0kb upstream 1.0kb upstream 1000 false Scaffold1961: 266579-267578 Capsella grandiflora
Cagra.1961s0070 1.0kb downstream 1.0kb downstream 2340 true Scaffold1961: 267579-269918 Capsella grandiflora
Cagra.1961s0070 1.0kb downstream 1.0kb downstream 1000 false Scaffold1961: 268919-269918 Capsella grandiflora
Cagra.1961s0070 2.0kb upstream 2.0kb upstream 3340 true Scaffold1961: 265579-268918 Capsella grandiflora
Cagra.1961s0070 2.0kb upstream 2.0kb upstream 2000 false Scaffold1961: 265579-267578 Capsella grandiflora
Cagra.1961s0070 2.0kb downstream 2.0kb downstream 3340 true Scaffold1961: 267579-270918 Capsella grandiflora
Cagra.1961s0070 2.0kb downstream 2.0kb downstream 2000 false Scaffold1961: 268919-270918 Capsella grandiflora
Cagra.1961s0070 5.0kb upstream 5.0kb upstream 6340 true Scaffold1961: 262579-268918 Capsella grandiflora
Cagra.1961s0070 5.0kb upstream 5.0kb upstream 5000 false Scaffold1961: 262579-267578 Capsella grandiflora
Cagra.1961s0070 5.0kb downstream 5.0kb downstream 6340 true Scaffold1961: 267579-273918 Capsella grandiflora
Cagra.1961s0070 5.0kb downstream 5.0kb downstream 5000 false Scaffold1961: 268919-273918 Capsella grandiflora
Cagra.1961s0070 10.0kb upstream 10.0kb upstream 11340 true Scaffold1961: 257579-268918 Capsella grandiflora
Cagra.1961s0070 10.0kb upstream 10.0kb upstream 10000 false Scaffold1961: 257579-267578 Capsella grandiflora
Cagra.1961s0070 10.0kb downstream 10.0kb downstream 11340 true Scaffold1961: 267579-278918 Capsella grandiflora
Cagra.1961s0070 10.0kb downstream 10.0kb downstream 10000 false Scaffold1961: 268919-278918 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377081 5261 Brassicaceae View MSA
123839828 5264 Brassicales-Malvales View MSA
124341264 5266 SBM View MSA
124252660 5268 Malvidae View MSA
124066658 5270 Rosid View MSA
123750017 5271 Pentapetalae View MSA
122793132 5272 Eudicot View MSA
122043579 5273 Angiosperm View MSA
121350090 5274 Embryophyte View MSA
123428794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain