Gene : orange1.1g009994m.g C. sinensis v1.1
Defline:  (1 of 3) 1.14.13.132 - Squalene monooxygenase / Squalene epoxidase Genomic Order:  60
Name:  ? orange1.1g009994m.g Secondary Identifier:  ? PAC:18124875
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-2541 Citrus sinensis pathologic  
Csinensis PWY-5670 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g009994m.g 0.5kb upstream 0.5kb upstream 4420 true scaffold00006: 506566-510985 Citrus sinensis
orange1.1g009994m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 510486-510985 Citrus sinensis
orange1.1g009994m.g 0.5kb downstream 0.5kb downstream 4420 true scaffold00006: 506066-510485 Citrus sinensis
orange1.1g009994m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 506066-506565 Citrus sinensis
orange1.1g009994m.g 1.0kb upstream 1.0kb upstream 4920 true scaffold00006: 506566-511485 Citrus sinensis
orange1.1g009994m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 510486-511485 Citrus sinensis
orange1.1g009994m.g 1.0kb downstream 1.0kb downstream 4920 true scaffold00006: 505566-510485 Citrus sinensis
orange1.1g009994m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 505566-506565 Citrus sinensis
orange1.1g009994m.g 2.0kb upstream 2.0kb upstream 5920 true scaffold00006: 506566-512485 Citrus sinensis
orange1.1g009994m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 510486-512485 Citrus sinensis
orange1.1g009994m.g 2.0kb downstream 2.0kb downstream 5920 true scaffold00006: 504566-510485 Citrus sinensis
orange1.1g009994m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 504566-506565 Citrus sinensis
orange1.1g009994m.g 5.0kb upstream 5.0kb upstream 8920 true scaffold00006: 506566-515485 Citrus sinensis
orange1.1g009994m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 510486-515485 Citrus sinensis
orange1.1g009994m.g 5.0kb downstream 5.0kb downstream 8920 true scaffold00006: 501566-510485 Citrus sinensis
orange1.1g009994m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 501566-506565 Citrus sinensis
orange1.1g009994m.g 10.0kb upstream 10.0kb upstream 13920 true scaffold00006: 506566-520485 Citrus sinensis
orange1.1g009994m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 510486-520485 Citrus sinensis
orange1.1g009994m.g 10.0kb downstream 10.0kb downstream 13920 true scaffold00006: 496566-510485 Citrus sinensis
orange1.1g009994m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 496566-506565 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124342457 5266 SBM View MSA
124254451 5268 Malvidae View MSA
124072398 5270 Rosid View MSA
123747368 5271 Pentapetalae View MSA
122788930 5272 Eudicot View MSA
122042003 5273 Angiosperm View MSA
121344187 5274 Embryophyte View MSA
123428498 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain