Gene : orange1.1g025478m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR31573:SF1 - ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 2 Genomic Order:  418
Name:  ? orange1.1g025478m.g Secondary Identifier:  ? PAC:18112098
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g025478m.g 0.5kb upstream 0.5kb upstream 2136 true scaffold00007: 2571940-2574075 Citrus sinensis
orange1.1g025478m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00007: 2571940-2572439 Citrus sinensis
orange1.1g025478m.g 0.5kb downstream 0.5kb downstream 2136 true scaffold00007: 2572440-2574575 Citrus sinensis
orange1.1g025478m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00007: 2574076-2574575 Citrus sinensis
orange1.1g025478m.g 1.0kb upstream 1.0kb upstream 2636 true scaffold00007: 2571440-2574075 Citrus sinensis
orange1.1g025478m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00007: 2571440-2572439 Citrus sinensis
orange1.1g025478m.g 1.0kb downstream 1.0kb downstream 2636 true scaffold00007: 2572440-2575075 Citrus sinensis
orange1.1g025478m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00007: 2574076-2575075 Citrus sinensis
orange1.1g025478m.g 2.0kb upstream 2.0kb upstream 3636 true scaffold00007: 2570440-2574075 Citrus sinensis
orange1.1g025478m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00007: 2570440-2572439 Citrus sinensis
orange1.1g025478m.g 2.0kb downstream 2.0kb downstream 3636 true scaffold00007: 2572440-2576075 Citrus sinensis
orange1.1g025478m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00007: 2574076-2576075 Citrus sinensis
orange1.1g025478m.g 5.0kb upstream 5.0kb upstream 6636 true scaffold00007: 2567440-2574075 Citrus sinensis
orange1.1g025478m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00007: 2567440-2572439 Citrus sinensis
orange1.1g025478m.g 5.0kb downstream 5.0kb downstream 6636 true scaffold00007: 2572440-2579075 Citrus sinensis
orange1.1g025478m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00007: 2574076-2579075 Citrus sinensis
orange1.1g025478m.g 10.0kb upstream 10.0kb upstream 11636 true scaffold00007: 2562440-2574075 Citrus sinensis
orange1.1g025478m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00007: 2562440-2572439 Citrus sinensis
orange1.1g025478m.g 10.0kb downstream 10.0kb downstream 11636 true scaffold00007: 2572440-2584075 Citrus sinensis
orange1.1g025478m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00007: 2574076-2584075 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124344004 5266 SBM View MSA
124237545 5268 Malvidae View MSA
124050829 5270 Rosid View MSA
123749996 5271 Pentapetalae View MSA
122791674 5272 Eudicot View MSA
122048951 5273 Angiosperm View MSA
121351428 5274 Embryophyte View MSA
123423770 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain