Gene : orange1.1g002217m.g C. sinensis v1.1
Defline:  (1 of 2) 6.1.1.4 - Leucine--tRNA ligase / Leucyl-tRNA synthetase Genomic Order:  315
Name:  ? orange1.1g002217m.g Secondary Identifier:  ? PAC:18112543
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis TRNA-CHARGING-PWY Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g002217m.g 0.5kb upstream 0.5kb upstream 6789 true scaffold00007: 1994518-2001306 Citrus sinensis
orange1.1g002217m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00007: 2000807-2001306 Citrus sinensis
orange1.1g002217m.g 0.5kb downstream 0.5kb downstream 6789 true scaffold00007: 1994018-2000806 Citrus sinensis
orange1.1g002217m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00007: 1994018-1994517 Citrus sinensis
orange1.1g002217m.g 1.0kb upstream 1.0kb upstream 7289 true scaffold00007: 1994518-2001806 Citrus sinensis
orange1.1g002217m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00007: 2000807-2001806 Citrus sinensis
orange1.1g002217m.g 1.0kb downstream 1.0kb downstream 7289 true scaffold00007: 1993518-2000806 Citrus sinensis
orange1.1g002217m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00007: 1993518-1994517 Citrus sinensis
orange1.1g002217m.g 2.0kb upstream 2.0kb upstream 8289 true scaffold00007: 1994518-2002806 Citrus sinensis
orange1.1g002217m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00007: 2000807-2002806 Citrus sinensis
orange1.1g002217m.g 2.0kb downstream 2.0kb downstream 8289 true scaffold00007: 1992518-2000806 Citrus sinensis
orange1.1g002217m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00007: 1992518-1994517 Citrus sinensis
orange1.1g002217m.g 5.0kb upstream 5.0kb upstream 11289 true scaffold00007: 1994518-2005806 Citrus sinensis
orange1.1g002217m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00007: 2000807-2005806 Citrus sinensis
orange1.1g002217m.g 5.0kb downstream 5.0kb downstream 11289 true scaffold00007: 1989518-2000806 Citrus sinensis
orange1.1g002217m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00007: 1989518-1994517 Citrus sinensis
orange1.1g002217m.g 10.0kb upstream 10.0kb upstream 16289 true scaffold00007: 1994518-2010806 Citrus sinensis
orange1.1g002217m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00007: 2000807-2010806 Citrus sinensis
orange1.1g002217m.g 10.0kb downstream 10.0kb downstream 16289 true scaffold00007: 1984518-2000806 Citrus sinensis
orange1.1g002217m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00007: 1984518-1994517 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
124336430 5266 SBM View MSA
124239362 5268 Malvidae View MSA
124073421 5270 Rosid View MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain