Gene : orange1.1g003348m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR23315//PTHR23315:SF117 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING Genomic Order:  141
Name:  ? orange1.1g003348m.g Secondary Identifier:  ? PAC:18124647
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g003348m.g 0.5kb upstream 0.5kb upstream 7542 true scaffold00006: 1088734-1096275 Citrus sinensis
orange1.1g003348m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00006: 1095776-1096275 Citrus sinensis
orange1.1g003348m.g 0.5kb downstream 0.5kb downstream 7542 true scaffold00006: 1088234-1095775 Citrus sinensis
orange1.1g003348m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00006: 1088234-1088733 Citrus sinensis
orange1.1g003348m.g 1.0kb upstream 1.0kb upstream 8042 true scaffold00006: 1088734-1096775 Citrus sinensis
orange1.1g003348m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00006: 1095776-1096775 Citrus sinensis
orange1.1g003348m.g 1.0kb downstream 1.0kb downstream 8042 true scaffold00006: 1087734-1095775 Citrus sinensis
orange1.1g003348m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00006: 1087734-1088733 Citrus sinensis
orange1.1g003348m.g 2.0kb upstream 2.0kb upstream 9042 true scaffold00006: 1088734-1097775 Citrus sinensis
orange1.1g003348m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00006: 1095776-1097775 Citrus sinensis
orange1.1g003348m.g 2.0kb downstream 2.0kb downstream 9042 true scaffold00006: 1086734-1095775 Citrus sinensis
orange1.1g003348m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00006: 1086734-1088733 Citrus sinensis
orange1.1g003348m.g 5.0kb upstream 5.0kb upstream 12042 true scaffold00006: 1088734-1100775 Citrus sinensis
orange1.1g003348m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00006: 1095776-1100775 Citrus sinensis
orange1.1g003348m.g 5.0kb downstream 5.0kb downstream 12042 true scaffold00006: 1083734-1095775 Citrus sinensis
orange1.1g003348m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00006: 1083734-1088733 Citrus sinensis
orange1.1g003348m.g 10.0kb upstream 10.0kb upstream 17042 true scaffold00006: 1088734-1105775 Citrus sinensis
orange1.1g003348m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00006: 1095776-1105775 Citrus sinensis
orange1.1g003348m.g 10.0kb downstream 10.0kb downstream 17042 true scaffold00006: 1078734-1095775 Citrus sinensis
orange1.1g003348m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00006: 1078734-1088733 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124346510 5266 SBM View MSA
124239775 5268 Malvidae View MSA
124065009 5270 Rosid View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain