Gene : orange1.1g001879m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR11468:SF8 - ALPHA-GLUCAN PHOSPHORYLASE 1 Genomic Order:  237
Name:  ? orange1.1g001879m.g Secondary Identifier:  ? PAC:18135055
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7238 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g001879m.g 0.5kb upstream 0.5kb upstream 7525 true scaffold00015: 1609608-1617132 Citrus sinensis
orange1.1g001879m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00015: 1609608-1610107 Citrus sinensis
orange1.1g001879m.g 0.5kb downstream 0.5kb downstream 7525 true scaffold00015: 1610108-1617632 Citrus sinensis
orange1.1g001879m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00015: 1617133-1617632 Citrus sinensis
orange1.1g001879m.g 1.0kb upstream 1.0kb upstream 8025 true scaffold00015: 1609108-1617132 Citrus sinensis
orange1.1g001879m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00015: 1609108-1610107 Citrus sinensis
orange1.1g001879m.g 1.0kb downstream 1.0kb downstream 8025 true scaffold00015: 1610108-1618132 Citrus sinensis
orange1.1g001879m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00015: 1617133-1618132 Citrus sinensis
orange1.1g001879m.g 2.0kb upstream 2.0kb upstream 9025 true scaffold00015: 1608108-1617132 Citrus sinensis
orange1.1g001879m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00015: 1608108-1610107 Citrus sinensis
orange1.1g001879m.g 2.0kb downstream 2.0kb downstream 9025 true scaffold00015: 1610108-1619132 Citrus sinensis
orange1.1g001879m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00015: 1617133-1619132 Citrus sinensis
orange1.1g001879m.g 5.0kb upstream 5.0kb upstream 12025 true scaffold00015: 1605108-1617132 Citrus sinensis
orange1.1g001879m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00015: 1605108-1610107 Citrus sinensis
orange1.1g001879m.g 5.0kb downstream 5.0kb downstream 12025 true scaffold00015: 1610108-1622132 Citrus sinensis
orange1.1g001879m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00015: 1617133-1622132 Citrus sinensis
orange1.1g001879m.g 10.0kb upstream 10.0kb upstream 17025 true scaffold00015: 1600108-1617132 Citrus sinensis
orange1.1g001879m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00015: 1600108-1610107 Citrus sinensis
orange1.1g001879m.g 10.0kb downstream 10.0kb downstream 17025 true scaffold00015: 1610108-1627132 Citrus sinensis
orange1.1g001879m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00015: 1617133-1627132 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350391 5266 SBM View MSA
124253620 5268 Malvidae View MSA
124071447 5270 Rosid View MSA
123744201 5271 Pentapetalae View MSA
122788131 5272 Eudicot View MSA
122045780 5273 Angiosperm View MSA
121351120 5274 Embryophyte View MSA
123425744 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain