Gene : orange1.1g039318m.g C. sinensis v1.1
Defline:  (1 of 12) PF00954//PF01453//PF07714//PF08276//PF11883 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) // Domain of unknown function (DUF3403) (DUF3403) Genomic Order:  149
Name:  ? orange1.1g039318m.g Secondary Identifier:  ? PAC:18130978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039318m.g 0.5kb upstream 0.5kb upstream 4218 true scaffold00012: 1982467-1986684 Citrus sinensis
orange1.1g039318m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00012: 1982467-1982966 Citrus sinensis
orange1.1g039318m.g 0.5kb downstream 0.5kb downstream 4218 true scaffold00012: 1982967-1987184 Citrus sinensis
orange1.1g039318m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00012: 1986685-1987184 Citrus sinensis
orange1.1g039318m.g 1.0kb upstream 1.0kb upstream 4718 true scaffold00012: 1981967-1986684 Citrus sinensis
orange1.1g039318m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00012: 1981967-1982966 Citrus sinensis
orange1.1g039318m.g 1.0kb downstream 1.0kb downstream 4718 true scaffold00012: 1982967-1987684 Citrus sinensis
orange1.1g039318m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00012: 1986685-1987684 Citrus sinensis
orange1.1g039318m.g 2.0kb upstream 2.0kb upstream 5718 true scaffold00012: 1980967-1986684 Citrus sinensis
orange1.1g039318m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00012: 1980967-1982966 Citrus sinensis
orange1.1g039318m.g 2.0kb downstream 2.0kb downstream 5718 true scaffold00012: 1982967-1988684 Citrus sinensis
orange1.1g039318m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00012: 1986685-1988684 Citrus sinensis
orange1.1g039318m.g 5.0kb upstream 5.0kb upstream 8718 true scaffold00012: 1977967-1986684 Citrus sinensis
orange1.1g039318m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00012: 1977967-1982966 Citrus sinensis
orange1.1g039318m.g 5.0kb downstream 5.0kb downstream 8718 true scaffold00012: 1982967-1991684 Citrus sinensis
orange1.1g039318m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00012: 1986685-1991684 Citrus sinensis
orange1.1g039318m.g 10.0kb upstream 10.0kb upstream 13718 true scaffold00012: 1972967-1986684 Citrus sinensis
orange1.1g039318m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00012: 1972967-1982966 Citrus sinensis
orange1.1g039318m.g 10.0kb downstream 10.0kb downstream 13718 true scaffold00012: 1982967-1996684 Citrus sinensis
orange1.1g039318m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00012: 1986685-1996684 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350841 5266 SBM View MSA
124252991 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain