Gene : orange1.1g012057m.g C. sinensis v1.1
Defline:  (1 of 53) 3.2.1.15 - Polygalacturonase / Pectinase Genomic Order:  198
Name:  ? orange1.1g012057m.g Secondary Identifier:  ? PAC:18109447
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1081 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g012057m.g 0.5kb upstream 0.5kb upstream 3227 true scaffold00016: 1403243-1406469 Citrus sinensis
orange1.1g012057m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00016: 1403243-1403742 Citrus sinensis
orange1.1g012057m.g 0.5kb downstream 0.5kb downstream 3227 true scaffold00016: 1403743-1406969 Citrus sinensis
orange1.1g012057m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00016: 1406470-1406969 Citrus sinensis
orange1.1g012057m.g 1.0kb upstream 1.0kb upstream 3727 true scaffold00016: 1402743-1406469 Citrus sinensis
orange1.1g012057m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00016: 1402743-1403742 Citrus sinensis
orange1.1g012057m.g 1.0kb downstream 1.0kb downstream 3727 true scaffold00016: 1403743-1407469 Citrus sinensis
orange1.1g012057m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00016: 1406470-1407469 Citrus sinensis
orange1.1g012057m.g 2.0kb upstream 2.0kb upstream 4727 true scaffold00016: 1401743-1406469 Citrus sinensis
orange1.1g012057m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00016: 1401743-1403742 Citrus sinensis
orange1.1g012057m.g 2.0kb downstream 2.0kb downstream 4727 true scaffold00016: 1403743-1408469 Citrus sinensis
orange1.1g012057m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00016: 1406470-1408469 Citrus sinensis
orange1.1g012057m.g 5.0kb upstream 5.0kb upstream 7727 true scaffold00016: 1398743-1406469 Citrus sinensis
orange1.1g012057m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00016: 1398743-1403742 Citrus sinensis
orange1.1g012057m.g 5.0kb downstream 5.0kb downstream 7727 true scaffold00016: 1403743-1411469 Citrus sinensis
orange1.1g012057m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00016: 1406470-1411469 Citrus sinensis
orange1.1g012057m.g 10.0kb upstream 10.0kb upstream 12727 true scaffold00016: 1393743-1406469 Citrus sinensis
orange1.1g012057m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00016: 1393743-1403742 Citrus sinensis
orange1.1g012057m.g 10.0kb downstream 10.0kb downstream 12727 true scaffold00016: 1403743-1416469 Citrus sinensis
orange1.1g012057m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00016: 1406470-1416469 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337988 5266 SBM View MSA
124242051 5268 Malvidae View MSA
124065487 5270 Rosid View MSA
123736627 5271 Pentapetalae View MSA
122795582 5272 Eudicot View MSA
122048646 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain