Gene : orange1.1g039074m.g C. sinensis v1.1
Defline:  (1 of 2) PTHR21266:SF29 - PROTEIN TIC 55, CHLOROPLASTIC Genomic Order:  111
Name:  ? orange1.1g039074m.g Secondary Identifier:  ? PAC:18109304
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-5098 Citrus sinensis pathologic  
Csinensis PWY-6927 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g039074m.g 0.5kb upstream 0.5kb upstream 2859 true scaffold00025: 824128-826986 Citrus sinensis
orange1.1g039074m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00025: 824128-824627 Citrus sinensis
orange1.1g039074m.g 0.5kb downstream 0.5kb downstream 2859 true scaffold00025: 824628-827486 Citrus sinensis
orange1.1g039074m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00025: 826987-827486 Citrus sinensis
orange1.1g039074m.g 1.0kb upstream 1.0kb upstream 3359 true scaffold00025: 823628-826986 Citrus sinensis
orange1.1g039074m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00025: 823628-824627 Citrus sinensis
orange1.1g039074m.g 1.0kb downstream 1.0kb downstream 3359 true scaffold00025: 824628-827986 Citrus sinensis
orange1.1g039074m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00025: 826987-827986 Citrus sinensis
orange1.1g039074m.g 2.0kb upstream 2.0kb upstream 4359 true scaffold00025: 822628-826986 Citrus sinensis
orange1.1g039074m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00025: 822628-824627 Citrus sinensis
orange1.1g039074m.g 2.0kb downstream 2.0kb downstream 4359 true scaffold00025: 824628-828986 Citrus sinensis
orange1.1g039074m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00025: 826987-828986 Citrus sinensis
orange1.1g039074m.g 5.0kb upstream 5.0kb upstream 7359 true scaffold00025: 819628-826986 Citrus sinensis
orange1.1g039074m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00025: 819628-824627 Citrus sinensis
orange1.1g039074m.g 5.0kb downstream 5.0kb downstream 7359 true scaffold00025: 824628-831986 Citrus sinensis
orange1.1g039074m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00025: 826987-831986 Citrus sinensis
orange1.1g039074m.g 10.0kb upstream 10.0kb upstream 12359 true scaffold00025: 814628-826986 Citrus sinensis
orange1.1g039074m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00025: 814628-824627 Citrus sinensis
orange1.1g039074m.g 10.0kb downstream 10.0kb downstream 12359 true scaffold00025: 824628-836986 Citrus sinensis
orange1.1g039074m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00025: 826987-836986 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124343991 5266 SBM View MSA
124246740 5268 Malvidae View MSA
124068769 5270 Rosid View MSA
123736792 5271 Pentapetalae View MSA
122790775 5272 Eudicot View MSA
122046854 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121343903 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain