Gene : orange1.1g047315m.g C. sinensis v1.1
Defline:  (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN Genomic Order:  204
Name:  ? orange1.1g047315m.g Secondary Identifier:  ? PAC:18099475
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-1081 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g047315m.g 0.5kb upstream 0.5kb upstream 2548 true scaffold00023: 1324152-1326699 Citrus sinensis
orange1.1g047315m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00023: 1324152-1324651 Citrus sinensis
orange1.1g047315m.g 0.5kb downstream 0.5kb downstream 2548 true scaffold00023: 1324652-1327199 Citrus sinensis
orange1.1g047315m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00023: 1326700-1327199 Citrus sinensis
orange1.1g047315m.g 1.0kb upstream 1.0kb upstream 3048 true scaffold00023: 1323652-1326699 Citrus sinensis
orange1.1g047315m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00023: 1323652-1324651 Citrus sinensis
orange1.1g047315m.g 1.0kb downstream 1.0kb downstream 3048 true scaffold00023: 1324652-1327699 Citrus sinensis
orange1.1g047315m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00023: 1326700-1327699 Citrus sinensis
orange1.1g047315m.g 2.0kb upstream 2.0kb upstream 4048 true scaffold00023: 1322652-1326699 Citrus sinensis
orange1.1g047315m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00023: 1322652-1324651 Citrus sinensis
orange1.1g047315m.g 2.0kb downstream 2.0kb downstream 4048 true scaffold00023: 1324652-1328699 Citrus sinensis
orange1.1g047315m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00023: 1326700-1328699 Citrus sinensis
orange1.1g047315m.g 5.0kb upstream 5.0kb upstream 7048 true scaffold00023: 1319652-1326699 Citrus sinensis
orange1.1g047315m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00023: 1319652-1324651 Citrus sinensis
orange1.1g047315m.g 5.0kb downstream 5.0kb downstream 7048 true scaffold00023: 1324652-1331699 Citrus sinensis
orange1.1g047315m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00023: 1326700-1331699 Citrus sinensis
orange1.1g047315m.g 10.0kb upstream 10.0kb upstream 12048 true scaffold00023: 1314652-1326699 Citrus sinensis
orange1.1g047315m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00023: 1314652-1324651 Citrus sinensis
orange1.1g047315m.g 10.0kb downstream 10.0kb downstream 12048 true scaffold00023: 1324652-1336699 Citrus sinensis
orange1.1g047315m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00023: 1326700-1336699 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain