Protein Family : Pectin lyase-like superfamily protein 124240129

Method ID:  5268 Method Name:  Malvidae
Sequence Alignment:  View MSA Member Count:  53

53 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
orange1.1g047315m.g (1 of 1) PTHR31375:SF11 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN / POLYGALACTURONASE (PECTINASE) FAMILY PROTEIN C. sinensis v1.1 2048   scaffold00023: 1324652-1326699
AT1G43090 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1954   Chr1: 16217197-16219150
AT1G78400 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1402   Chr1: 29498281-29499682
AT1G43100 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1955   Chr1: 16220519-16222473
AT1G43080 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1834   Chr1: 16213995-16215828
AT1G17150 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1789   Chr1: 5865707-5867495
AT2G40310 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1647   Chr2: 16834065-16835711
Thhalv10017763m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 1436   scaffold_10: 7183438-7184873
Thhalv10017738m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 1732   scaffold_10: 10736660-10738391
Thhalv10009641m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 2093   scaffold_5: 9616945-9619037
Thhalv10018650m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 1448   scaffold_9: 950122-951569
Ciclev10023493m.g (1 of 1) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED C. clementina v1.0 1666   scaffold_3: 29404073-29405738
Lus10042483.g (1 of 3) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED L. usitatissimum v1.0 1395   scaffold123: 2368723-2370117
Lus10026183.g (1 of 3) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED L. usitatissimum v1.0 1405   scaffold898: 34040-35444
Lus10026184.g (1 of 3) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED L. usitatissimum v1.0 1557   scaffold898: 36956-38512
Gorai.002G038500 (1 of 2) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED G. raimondii v2.1 2080   Chr02: 3077722-3079801
Gorai.006G016500 (1 of 2) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED G. raimondii v2.1 1401   Chr06: 3584504-3585904
Thecc1EG032333 (1 of 2) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED T. cacao v1.1 4766   scaffold_7: 10168188-10172953
Araha.1545s0008 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1497   Scaffold1545: 42334-43830
Araha.1545s0011 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1513   Scaffold1545: 53982-55494
Araha.5365s0005 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1867   Scaffold5365: 11871-13737
Araha.19354s0001 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1668   Scaffold19354: 4163-5830
Araha.24237s0008 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1398   Scaffold24237: 36889-38286
Cagra.0301s0071 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. grandiflora v1.1 1472   Scaffold301: 253170-254641
Cagra.0824s0084 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. grandiflora v1.1 1722   Scaffold824: 286144-287865
Cagra.1934s0004 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. grandiflora v1.1 1417   Scaffold1934: 19451-20867
Cagra.7053s0016 (1 of 6) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED C. grandiflora v1.1 1701   Scaffold7053: 59798-61498
Brara.F01203 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 1230   A06: 6676209-6677438
Brara.G00223 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 2047   A07: 2057052-2059098
Brara.G03581 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 1371   A07: 26674564-26675934

53 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10009641m E. salsugineum v1.0 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Lus10026183 L. usitatissimum v1.0 124240129 Pectin lyase-like superfamily protein 3 5268 Malvidae
Gorai.002G038500.1 G. raimondii v2.1 124240129 Pectin lyase-like superfamily protein 2 5268 Malvidae
Gorai.006G016500.1 G. raimondii v2.1 124240129 Pectin lyase-like superfamily protein 2 5268 Malvidae
Thecc1EG032333t1 T. cacao v1.1 124240129 Pectin lyase-like superfamily protein 1 5268 Malvidae
Cagra.7053s0016.1.p C. grandiflora v1.1 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Bostr.23794s0789.1.p B. stricta v1.2 124240129 Pectin lyase-like superfamily protein 3 5268 Malvidae
AL4G38120.t1 A. lyrata v2.1 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AL2G38770.t1 A. lyrata v2.1 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
Carub.0004s1459.1.p C. rubella v1.1 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Carub.0002s2530.1.p C. rubella v1.1 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Carub.0002s0725.1.p C. rubella v1.1 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
orange1.1g047315m C. sinensis v1.1 124240129 Pectin lyase-like superfamily protein 1 5268 Malvidae
AT1G43080.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AT1G43090.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AT1G17150.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AT1G78400.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AT1G43100.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
AT2G40310.1 A. thaliana TAIR10 124240129 Pectin lyase-like superfamily protein 6 5268 Malvidae
Thhalv10018650m E. salsugineum v1.0 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Thhalv10017763m E. salsugineum v1.0 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Thhalv10017738m E. salsugineum v1.0 124240129 Pectin lyase-like superfamily protein 4 5268 Malvidae
Ciclev10023493m C. clementina v1.0 124240129 Pectin lyase-like superfamily protein 1 5268 Malvidae
Lus10042483 L. usitatissimum v1.0 124240129 Pectin lyase-like superfamily protein 3 5268 Malvidae
Lus10026184 L. usitatissimum v1.0 124240129 Pectin lyase-like superfamily protein 3 5268 Malvidae
Araha.19354s0001.1.p A. halleri v1.1 124240129 Pectin lyase-like superfamily protein 5 5268 Malvidae
Araha.5365s0005.1.p A. halleri v1.1 124240129 Pectin lyase-like superfamily protein 5 5268 Malvidae
Araha.1545s0008.1.p A. halleri v1.1 124240129 Pectin lyase-like superfamily protein 5 5268 Malvidae
Araha.24237s0008.1.p A. halleri v1.1 124240129 Pectin lyase-like superfamily protein 5 5268 Malvidae
Araha.1545s0011.1.p A. halleri v1.1 124240129 Pectin lyase-like superfamily protein 5 5268 Malvidae