Gene : Gorai.002G038500 G. raimondii v2.1
Defline:  (1 of 2) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Genomic Order:  385
Name:  ? Gorai.002G038500 Secondary Identifier:  ? PAC:26796219
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1081 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.002G038500 0.5kb upstream 0.5kb upstream 2580 true Chr02: 3077722-3080301 Gossypium raimondii
Gorai.002G038500 0.5kb upstream 0.5kb upstream 500 false Chr02: 3079802-3080301 Gossypium raimondii
Gorai.002G038500 0.5kb downstream 0.5kb downstream 2580 true Chr02: 3077222-3079801 Gossypium raimondii
Gorai.002G038500 0.5kb downstream 0.5kb downstream 500 false Chr02: 3077222-3077721 Gossypium raimondii
Gorai.002G038500 1.0kb upstream 1.0kb upstream 3080 true Chr02: 3077722-3080801 Gossypium raimondii
Gorai.002G038500 1.0kb upstream 1.0kb upstream 1000 false Chr02: 3079802-3080801 Gossypium raimondii
Gorai.002G038500 1.0kb downstream 1.0kb downstream 3080 true Chr02: 3076722-3079801 Gossypium raimondii
Gorai.002G038500 1.0kb downstream 1.0kb downstream 1000 false Chr02: 3076722-3077721 Gossypium raimondii
Gorai.002G038500 2.0kb upstream 2.0kb upstream 4080 true Chr02: 3077722-3081801 Gossypium raimondii
Gorai.002G038500 2.0kb upstream 2.0kb upstream 2000 false Chr02: 3079802-3081801 Gossypium raimondii
Gorai.002G038500 2.0kb downstream 2.0kb downstream 4080 true Chr02: 3075722-3079801 Gossypium raimondii
Gorai.002G038500 2.0kb downstream 2.0kb downstream 2000 false Chr02: 3075722-3077721 Gossypium raimondii
Gorai.002G038500 5.0kb upstream 5.0kb upstream 7080 true Chr02: 3077722-3084801 Gossypium raimondii
Gorai.002G038500 5.0kb upstream 5.0kb upstream 5000 false Chr02: 3079802-3084801 Gossypium raimondii
Gorai.002G038500 5.0kb downstream 5.0kb downstream 7080 true Chr02: 3072722-3079801 Gossypium raimondii
Gorai.002G038500 5.0kb downstream 5.0kb downstream 5000 false Chr02: 3072722-3077721 Gossypium raimondii
Gorai.002G038500 10.0kb upstream 10.0kb upstream 12080 true Chr02: 3077722-3089801 Gossypium raimondii
Gorai.002G038500 10.0kb upstream 10.0kb upstream 10000 false Chr02: 3079802-3089801 Gossypium raimondii
Gorai.002G038500 10.0kb downstream 10.0kb downstream 12080 true Chr02: 3067722-3079801 Gossypium raimondii
Gorai.002G038500 10.0kb downstream 10.0kb downstream 10000 false Chr02: 3067722-3077721 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837525 5264 Brassicales-Malvales View MSA
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain