Gene : Araha.19354s0001 A. halleri v1.1
Defline:  (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  1
Name:  ? Araha.19354s0001 Secondary Identifier:  ? PAC:28836886
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.19354s0001 0.5kb upstream 0.5kb upstream 2168 true Scaffold19354: 3663-5830 Arabidopsis halleri
Araha.19354s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold19354: 3663-4162 Arabidopsis halleri
Araha.19354s0001 0.5kb downstream 0.5kb downstream 2168 true Scaffold19354: 4163-6330 Arabidopsis halleri
Araha.19354s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold19354: 5831-6330 Arabidopsis halleri
Araha.19354s0001 1.0kb upstream 1.0kb upstream 2668 true Scaffold19354: 3163-5830 Arabidopsis halleri
Araha.19354s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold19354: 3163-4162 Arabidopsis halleri
Araha.19354s0001 1.0kb downstream 1.0kb downstream 2668 true Scaffold19354: 4163-6830 Arabidopsis halleri
Araha.19354s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold19354: 5831-6830 Arabidopsis halleri
Araha.19354s0001 2.0kb upstream 2.0kb upstream 3668 true Scaffold19354: 2163-5830 Arabidopsis halleri
Araha.19354s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold19354: 2163-4162 Arabidopsis halleri
Araha.19354s0001 2.0kb downstream 2.0kb downstream 3668 true Scaffold19354: 4163-7830 Arabidopsis halleri
Araha.19354s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold19354: 5831-7830 Arabidopsis halleri
Araha.19354s0001 5.0kb upstream 5.0kb upstream 5830 true Scaffold19354: 1-5830 Arabidopsis halleri
Araha.19354s0001 5.0kb upstream 5.0kb upstream 4162 false Scaffold19354: 1-4162 Arabidopsis halleri
Araha.19354s0001 5.0kb downstream 5.0kb downstream 6668 true Scaffold19354: 4163-10830 Arabidopsis halleri
Araha.19354s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold19354: 5831-10830 Arabidopsis halleri
Araha.19354s0001 10.0kb upstream 10.0kb upstream 5830 true Scaffold19354: 1-5830 Arabidopsis halleri
Araha.19354s0001 10.0kb upstream 10.0kb upstream 4162 false Scaffold19354: 1-4162 Arabidopsis halleri
Araha.19354s0001 10.0kb downstream 10.0kb downstream 7075 true Scaffold19354: 4163-11237 Arabidopsis halleri
Araha.19354s0001 10.0kb downstream 10.0kb downstream 5407 false Scaffold19354: 5831-11237 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362883 5261 Brassicaceae View MSA
123837525 5264 Brassicales-Malvales View MSA
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain