Gene : Araha.5365s0005 A. halleri v1.1
Defline:  (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  5
Name:  ? Araha.5365s0005 Secondary Identifier:  ? PAC:28841104
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ahalleri PWY-1081 Arabidopsis halleri pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Araha.5365s0005 0.5kb upstream 0.5kb upstream 2367 true Scaffold5365: 11371-13737 Arabidopsis halleri
Araha.5365s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold5365: 11371-11870 Arabidopsis halleri
Araha.5365s0005 0.5kb downstream 0.5kb downstream 2367 true Scaffold5365: 11871-14237 Arabidopsis halleri
Araha.5365s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold5365: 13738-14237 Arabidopsis halleri
Araha.5365s0005 1.0kb upstream 1.0kb upstream 2867 true Scaffold5365: 10871-13737 Arabidopsis halleri
Araha.5365s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold5365: 10871-11870 Arabidopsis halleri
Araha.5365s0005 1.0kb downstream 1.0kb downstream 2867 true Scaffold5365: 11871-14737 Arabidopsis halleri
Araha.5365s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold5365: 13738-14737 Arabidopsis halleri
Araha.5365s0005 2.0kb upstream 2.0kb upstream 3867 true Scaffold5365: 9871-13737 Arabidopsis halleri
Araha.5365s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold5365: 9871-11870 Arabidopsis halleri
Araha.5365s0005 2.0kb downstream 2.0kb downstream 3867 true Scaffold5365: 11871-15737 Arabidopsis halleri
Araha.5365s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold5365: 13738-15737 Arabidopsis halleri
Araha.5365s0005 5.0kb upstream 5.0kb upstream 6867 true Scaffold5365: 6871-13737 Arabidopsis halleri
Araha.5365s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold5365: 6871-11870 Arabidopsis halleri
Araha.5365s0005 5.0kb downstream 5.0kb downstream 6867 true Scaffold5365: 11871-18737 Arabidopsis halleri
Araha.5365s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold5365: 13738-18737 Arabidopsis halleri
Araha.5365s0005 10.0kb upstream 10.0kb upstream 11867 true Scaffold5365: 1871-13737 Arabidopsis halleri
Araha.5365s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold5365: 1871-11870 Arabidopsis halleri
Araha.5365s0005 10.0kb downstream 10.0kb downstream 11867 true Scaffold5365: 11871-23737 Arabidopsis halleri
Araha.5365s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold5365: 13738-23737 Arabidopsis halleri

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381128 5261 Brassicaceae View MSA
123837525 5264 Brassicales-Malvales View MSA
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain