Protein Family : Pectin lyase-like superfamily protein 122381128

Method ID:  5261 Method Name:  Brassicaceae
Sequence Alignment:  View MSA Member Count:  24

24 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
AT1G43090 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1954   Chr1: 16217197-16219150
AT1G43100 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1955   Chr1: 16220519-16222473
AT1G43080 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1834   Chr1: 16213995-16215828
AT1G17150 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1789   Chr1: 5865707-5867495
AT2G40310 (1 of 16) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. thaliana TAIR10 1647   Chr2: 16834065-16835711
Thhalv10017738m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 1732   scaffold_10: 10736660-10738391
Thhalv10009641m.g (1 of 8) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase E. salsugineum v1.0 2093   scaffold_5: 9616945-9619037
Araha.1545s0008 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1497   Scaffold1545: 42334-43830
Araha.1545s0011 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1513   Scaffold1545: 53982-55494
Araha.5365s0005 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. halleri v1.1 1867   Scaffold5365: 11871-13737
Cagra.0824s0084 (1 of 5) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. grandiflora v1.1 1722   Scaffold824: 286144-287865
Cagra.7053s0016 (1 of 6) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED C. grandiflora v1.1 1701   Scaffold7053: 59798-61498
Brara.F01203 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 1230   A06: 6676209-6677438
Brara.G00223 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 2047   A07: 2057052-2059098
Brara.C02070 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 1622   A03: 10334322-10335943
Brara.C02559 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 1550   A03: 12918324-12919873
Brara.C02225 (1 of 17) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. rapa FPsc v1.3 2414   A03: 11181058-11183471
Bostr.7128s0326 (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase B. stricta v1.2 9248   Scaffold7128: 1435980-1445227
AL1G51540 (1 of 11) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. lyrata v2.1 2435   scaffold_1: 21799997-21802431
AL4G38120 (1 of 11) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. lyrata v2.1 1769   scaffold_4: 19684870-19686638
AL6G43180 (1 of 11) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. lyrata v2.1 1877   scaffold_6: 19477860-19479736
AL1G29380 (1 of 11) 3.2.1.67 - Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase A. lyrata v2.1 1343   scaffold_1: 7177790-7179132
Carub.0004s2255 (1 of 9) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. rubella v1.1 1716   scaffold_4: 11984902-11986617
Carub.0002s0725 (1 of 9) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase C. rubella v1.1 1653   scaffold_2: 3294865-3296517

24 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Thhalv10009641m E. salsugineum v1.0 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Cagra.7053s0016.1.p C. grandiflora v1.1 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Carub.0002s0725.1.p C. rubella v1.1 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
AT1G17150.1 A. thaliana TAIR10 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
AT1G43080.1 A. thaliana TAIR10 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
AT1G43100.1 A. thaliana TAIR10 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
AT2G40310.1 A. thaliana TAIR10 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
AT1G43090.1 A. thaliana TAIR10 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Thhalv10017738m E. salsugineum v1.0 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Araha.1545s0008.1.p A. halleri v1.1 122381128 Pectin lyase-like superfamily protein 3 5261 Brassicaceae
Araha.5365s0005.1.p A. halleri v1.1 122381128 Pectin lyase-like superfamily protein 3 5261 Brassicaceae
Araha.1545s0011.1.p A. halleri v1.1 122381128 Pectin lyase-like superfamily protein 3 5261 Brassicaceae
Cagra.0824s0084.1.p C. grandiflora v1.1 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae
Brara.C02225.1.p B. rapa FPsc v1.3 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Brara.F01203.1.p B. rapa FPsc v1.3 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Brara.C02070.1.p B. rapa FPsc v1.3 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Brara.C02559.1.p B. rapa FPsc v1.3 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Brara.G00223.1.p B. rapa FPsc v1.3 122381128 Pectin lyase-like superfamily protein 5 5261 Brassicaceae
Bostr.7128s0326.1.p B. stricta v1.2 122381128 Pectin lyase-like superfamily protein 1 5261 Brassicaceae
AL1G51540.t1 A. lyrata v2.1 122381128 Pectin lyase-like superfamily protein 4 5261 Brassicaceae
AL4G38120.t1 A. lyrata v2.1 122381128 Pectin lyase-like superfamily protein 4 5261 Brassicaceae
AL1G29380.t1 A. lyrata v2.1 122381128 Pectin lyase-like superfamily protein 4 5261 Brassicaceae
AL6G43180.t1 A. lyrata v2.1 122381128 Pectin lyase-like superfamily protein 4 5261 Brassicaceae
Carub.0004s2255.1.p C. rubella v1.1 122381128 Pectin lyase-like superfamily protein 2 5261 Brassicaceae