Gene : Bostr.7128s0326 B. stricta v1.2
Defline:  (1 of 8) 3.2.1.15//3.2.1.67 - Polygalacturonase / Pectinase // Galacturan 1,4-alpha-galacturonidase / Poly(galacturonate) hydrolase Genomic Order:  326
Name:  ? Bostr.7128s0326 Secondary Identifier:  ? PAC:30660708
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bstricta PWY-1081 Boechera stricta pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bostr.7128s0326 0.5kb upstream 0.5kb upstream 9748 true Scaffold7128: 1435480-1445227 Boechera stricta
Bostr.7128s0326 0.5kb upstream 0.5kb upstream 500 false Scaffold7128: 1435480-1435979 Boechera stricta
Bostr.7128s0326 0.5kb downstream 0.5kb downstream 9748 true Scaffold7128: 1435980-1445727 Boechera stricta
Bostr.7128s0326 0.5kb downstream 0.5kb downstream 500 false Scaffold7128: 1445228-1445727 Boechera stricta
Bostr.7128s0326 1.0kb upstream 1.0kb upstream 10248 true Scaffold7128: 1434980-1445227 Boechera stricta
Bostr.7128s0326 1.0kb upstream 1.0kb upstream 1000 false Scaffold7128: 1434980-1435979 Boechera stricta
Bostr.7128s0326 1.0kb downstream 1.0kb downstream 10248 true Scaffold7128: 1435980-1446227 Boechera stricta
Bostr.7128s0326 1.0kb downstream 1.0kb downstream 1000 false Scaffold7128: 1445228-1446227 Boechera stricta
Bostr.7128s0326 2.0kb upstream 2.0kb upstream 11248 true Scaffold7128: 1433980-1445227 Boechera stricta
Bostr.7128s0326 2.0kb upstream 2.0kb upstream 2000 false Scaffold7128: 1433980-1435979 Boechera stricta
Bostr.7128s0326 2.0kb downstream 2.0kb downstream 11248 true Scaffold7128: 1435980-1447227 Boechera stricta
Bostr.7128s0326 2.0kb downstream 2.0kb downstream 2000 false Scaffold7128: 1445228-1447227 Boechera stricta
Bostr.7128s0326 5.0kb upstream 5.0kb upstream 14248 true Scaffold7128: 1430980-1445227 Boechera stricta
Bostr.7128s0326 5.0kb upstream 5.0kb upstream 5000 false Scaffold7128: 1430980-1435979 Boechera stricta
Bostr.7128s0326 5.0kb downstream 5.0kb downstream 14248 true Scaffold7128: 1435980-1450227 Boechera stricta
Bostr.7128s0326 5.0kb downstream 5.0kb downstream 5000 false Scaffold7128: 1445228-1450227 Boechera stricta
Bostr.7128s0326 10.0kb upstream 10.0kb upstream 19248 true Scaffold7128: 1425980-1445227 Boechera stricta
Bostr.7128s0326 10.0kb upstream 10.0kb upstream 10000 false Scaffold7128: 1425980-1435979 Boechera stricta
Bostr.7128s0326 10.0kb downstream 10.0kb downstream 19248 true Scaffold7128: 1435980-1455227 Boechera stricta
Bostr.7128s0326 10.0kb downstream 10.0kb downstream 10000 false Scaffold7128: 1445228-1455227 Boechera stricta

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381128 5261 Brassicaceae View MSA
123837525 5264 Brassicales-Malvales View MSA
124337889 5266 SBM View MSA
124240129 5268 Malvidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain