Gene : orange1.1g048404m.g C. sinensis v1.1
Defline:  (1 of 18) KOG0417 - Ubiquitin-protein ligase Genomic Order:  38
Name:  ? orange1.1g048404m.g Secondary Identifier:  ? PAC:18107059
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Csinensis PWY-7511 Citrus sinensis pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
orange1.1g048404m.g 0.5kb upstream 0.5kb upstream 2441 true scaffold00036: 208088-210528 Citrus sinensis
orange1.1g048404m.g 0.5kb upstream 0.5kb upstream 500 false scaffold00036: 210029-210528 Citrus sinensis
orange1.1g048404m.g 0.5kb downstream 0.5kb downstream 2441 true scaffold00036: 207588-210028 Citrus sinensis
orange1.1g048404m.g 0.5kb downstream 0.5kb downstream 500 false scaffold00036: 207588-208087 Citrus sinensis
orange1.1g048404m.g 1.0kb upstream 1.0kb upstream 2941 true scaffold00036: 208088-211028 Citrus sinensis
orange1.1g048404m.g 1.0kb upstream 1.0kb upstream 1000 false scaffold00036: 210029-211028 Citrus sinensis
orange1.1g048404m.g 1.0kb downstream 1.0kb downstream 2941 true scaffold00036: 207088-210028 Citrus sinensis
orange1.1g048404m.g 1.0kb downstream 1.0kb downstream 1000 false scaffold00036: 207088-208087 Citrus sinensis
orange1.1g048404m.g 2.0kb upstream 2.0kb upstream 3941 true scaffold00036: 208088-212028 Citrus sinensis
orange1.1g048404m.g 2.0kb upstream 2.0kb upstream 2000 false scaffold00036: 210029-212028 Citrus sinensis
orange1.1g048404m.g 2.0kb downstream 2.0kb downstream 3941 true scaffold00036: 206088-210028 Citrus sinensis
orange1.1g048404m.g 2.0kb downstream 2.0kb downstream 2000 false scaffold00036: 206088-208087 Citrus sinensis
orange1.1g048404m.g 5.0kb upstream 5.0kb upstream 6941 true scaffold00036: 208088-215028 Citrus sinensis
orange1.1g048404m.g 5.0kb upstream 5.0kb upstream 5000 false scaffold00036: 210029-215028 Citrus sinensis
orange1.1g048404m.g 5.0kb downstream 5.0kb downstream 6941 true scaffold00036: 203088-210028 Citrus sinensis
orange1.1g048404m.g 5.0kb downstream 5.0kb downstream 5000 false scaffold00036: 203088-208087 Citrus sinensis
orange1.1g048404m.g 10.0kb upstream 10.0kb upstream 11941 true scaffold00036: 208088-220028 Citrus sinensis
orange1.1g048404m.g 10.0kb upstream 10.0kb upstream 10000 false scaffold00036: 210029-220028 Citrus sinensis
orange1.1g048404m.g 10.0kb downstream 10.0kb downstream 11941 true scaffold00036: 198088-210028 Citrus sinensis
orange1.1g048404m.g 10.0kb downstream 10.0kb downstream 10000 false scaffold00036: 198088-208087 Citrus sinensis

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124350709 5266 SBM View MSA
124253903 5268 Malvidae View MSA
124072408 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain